RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 DNAJC27Q9NZQ0 273 aa15.84■□□□□ 0.13
HNRNPU-228ENST00000640306 CLEC2DQ9UHP7 191 aa15.84■□□□□ 0.13
HNRNPU-228ENST00000640306 SLC25A13Q9UJS0 675 aa15.84■□□□□ 0.13
HNRNPU-228ENST00000640306 TRBC2A0A5B9 178 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 ISPDA4D126 451 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 SAGE2PA6NJ88 616 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 E9PQ18 207 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 LOC110117498-PIK3R3F6TDL0 507 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 ARHGAP33O14559 1287 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 AP3D1O14617 1153 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 SLC16A5O15375 505 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 TEX28O15482 410 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 SLCO2B1O94956 709 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 PTPN5P54829 565 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 RSBN1Q5VWQ0 802 aaPredicted RBP15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 TNFAIP8L2Q6P589 184 aaPredicted RBP15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 TMEM220Q6QAJ8 160 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 COQ8BQ96D53 544 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 REEP4Q9H6H4 257 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 KCNE2Q9Y6J6 123 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 PNMA8CA0A1B0GUJ8 204 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 SMIM30A4D0T7 59 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 HAT1O14929 419 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 PSIP1O75475 530 aaKnown RBP15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 CCL5P13501 91 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 CHMP24386 653 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 CASP3P42574 277 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 TBPL1P62380 186 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF763Q0D2J5 394 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 ZMAT1Q5H9K5 638 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 MED27Q6P2C8 311 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 HMGN2P46Q86SG4 172 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 LSRQ86X29 649 aaPredicted RBP15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 DEPDC4Q8N2C3 294 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 CELF5Q8N6W0 485 aaKnown RBP15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 OR2A12Q8NGT7 310 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 FKBP14Q9NWM8 211 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 C5AR2Q9P296 337 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 CORO2BQ9UQ03 480 aa15.83■□□□□ 0.12
HNRNPU-228ENST00000640306 RNASET2O00584 256 aaKnown RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 OLFM2O95897 454 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 PPIBP23284 216 aaKnown RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 CDC42P60953 191 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 MXD1Q05195 221 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 GATAD2AQ86YP4 633 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF480Q8WV37 535 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 TXNDC15Q96J42 360 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 WRAP53Q9BUR4 548 aaKnown RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 CEP44Q9C0F1 390 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 NMNAT1Q9HAN9 279 aaPredicted RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 HS3ST2Q9Y278 367 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 PCM1Q15154 2024 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 TRBV4-1A0A0J9YWV2 114 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 UGDHO60701 494 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 GPX5O75715 221 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 CCNKO75909 580 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 CCNB2O95067 398 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 EFEMP2O95967 443 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 RECQLP46063 649 aaPredicted RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 SPIN4Q56A73 249 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 SLCO4C1Q6ZQN7 724 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 HTR3DQ70Z44 454 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■□□□□ 10.2
HNRNPU-228ENST00000640306 PAK6Q9NQU5 681 aaPredicted RBP15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 C1GALT1Q9NS00 363 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 DNAH14Q0VDD8 3507 aa15.82■□□□□ 0.12
HNRNPU-228ENST00000640306 ENTPD6O75354 484 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF45Q02386 682 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SSX1Q16384 188 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 NEK10Q6ZWH5 1172 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 CFAP206Q8IYR0 622 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SLC34A3Q8N130 599 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 DENND6BQ8NEG7 585 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 OR52N2Q8NGI0 321 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 RAB8BQ92930 207 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 NEDD4LQ96PU5 975 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PIP5K1AQ99755 562 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SLC46A2Q9BY10 475 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 ANKHQ9HCJ1 492 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SAGE1Q9NXZ1 904 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 HCN4Q9Y3Q4 1203 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 ZNF106Q9H2Y7 1883 aaKnown RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 RTCAO00442 366 aaKnown RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SH3BP5O60239 455 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 TPST2O60704 377 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 XPAP23025 273 aaPredicted RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SOX6P35712 828 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 BMPR1AP36894 532 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 DAB2P98082 770 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 RAB33AQ14088 237 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 TAB1Q15750 504 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 BCL7AQ4VC05 210 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 NXNL2Q5VZ03 156 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 PAQR6Q6TCH4 344 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 RBM45Q8IUH3 476 aaKnown RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 IL17FQ96PD4 163 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 SDHCQ99643 169 aaPredicted RBP15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 EMILIN2Q9BXX0 1053 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 HOXD1Q9GZZ0 328 aa15.81■□□□□ 0.12
HNRNPU-228ENST00000640306 LINC00597Q9H2U6 94 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms