RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 PCM1Q15154 2024 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 UBDO15205 165 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NVLO15381 856 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 FAM58BPP0C7Q3 252 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 HIST1H1TP22492 207 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 JAK1P23458 1154 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ATP5A1P25705 553 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GSTM2P28161 218 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GPC1P35052 558 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 CBX1P83916 185 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 CSTF3Q12996 717 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GGTA1PQ4G0N0 100 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 KANK2Q63ZY3 851 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 RHBDD2Q6NTF9 364 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PRMT9Q6P2P2 845 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GPR180Q86V85 440 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 LIX1Q8N485 282 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 STT3BQ8TCJ2 826 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 CREB3L4Q8TEY5 395 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ZCCHC14Q8WYQ9 949 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 KLHL29Q96CT2 875 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TWSG1Q9GZX9 223 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TCF7L2Q9NQB0 619 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 C5AR2Q9P296 337 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ENTPD4Q9Y227 616 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 DLGAP4Q9Y2H0 992 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 LRP4O75096 1905 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TP53BP1Q12888 1972 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 KCNE1BA0A087WTH5 132 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 C9JVG2 144 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 DYRK3O43781 588 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PRMT3O60678 531 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GALR3O60755 368 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PRKRAO75569 313 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 CPSF4O95639 269 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ABCB1P08183 1280 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NR2F6P10588 404 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 COX7A2P14406 83 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NT5EP21589 574 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PIK3R1P27986 724 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 EIF2S3P41091 472 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PGDP52209 483 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 MAD2L1Q13257 205 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NSDHLQ15738 373 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PRTGQ2VWP7 1150 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SPIN4Q56A73 249 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 YOD1Q5VVQ6 348 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TMEM214Q6NUQ4 689 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 FAM180BQ6P0A1 224 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ANGPTL8Q6UXH0 198 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 VN1R5Q7Z5H4 357 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 AMER3Q8N944 861 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SLC38A9Q8NBW4 561 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ZNF248Q8NDW4 579 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 WDR20Q8TBZ3 569 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NT5CQ8TCD5 201 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PROKR1Q8TCW9 393 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 C10orf90Q96M02 699 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ZNF578Q96N58 590 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SORT1Q99523 831 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PRPF18Q99633 342 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TMEM120AQ9BXJ8 343 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 AKTIPQ9H8T0 292 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SYNPO2LQ9H987 977 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 LYARQ9NX58 379 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PHF11Q9UIL8 331 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 KCND3Q9UK17 655 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 MAP4K5Q9Y4K4 846 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NEUROG3Q9Y4Z2 214 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PCDHGA8Q9Y5G5 932 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SCN3AQ9NY46 2000 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 A0A1W2PNU3 283 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 GMNCA6NCL1 334 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 A6NL46 340 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 FOXE1O00358 373 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 PLPP1O14494 284 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 LDB3O75112 727 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 VPS4BO75351 444 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SNUPNO95149 360 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NSA2O95478 260 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 IL3P08700 152 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 HSD3B1P14060 373 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 HSD3B2P26439 372 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 ARRB2P32121 409 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SOAT1P35610 550 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 FEN1P39748 380 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 OR4D2P58180 307 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 EEF1A2Q05639 463 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 RUNX2Q13950 521 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SPDYE7PQ495Y7 208 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SLC9B1Q4ZJI4 515 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 C10orf62Q5T681 223 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 NIPAL1Q6NVV3 410 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TIPARPQ7Z3E1 657 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 CEP70Q8NHQ1 597 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 RFWD2Q8NHY2 731 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 SNIP1Q8TAD8 396 aaKnown RBP5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 TBC1D20Q96BZ9 403 aa5.49□□□□□ -1.53
HNRNPU-220ENST00000639667 WDR34Q96EX3 536 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms