RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 MTCH1Q9NZJ7 389 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 USP3Q9Y6I4 520 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 FAM170BA6NMN3 283 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 AGRPO00253 132 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 ITGA10O75578 1167 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 GMPSP49915 693 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-209ENST00000639244 PLA2G16P53816 162 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 OGDHQ02218 1023 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 DUSP8Q13202 625 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 SNTB2Q13425 540 aaKnown RBP4.16□□□□□ -1.74
SCN3A-209ENST00000639244 SLC18A3Q16572 532 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 RBM48Q5RL73 367 aaKnown RBP4.16□□□□□ -1.74
SCN3A-209ENST00000639244 SLC9C2Q5TAH2 1124 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 TMPRSS11FQ6ZWK6 438 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF438Q7Z4V0 828 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 RHOT1Q8IXI2 618 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 FAM89BQ8N5H3 189 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 L3MBTL4Q8NA19 623 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 OR5M1Q8NGP8 315 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 OR11L1Q8NGX0 322 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 SEMA4DQ92854 862 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 RNF125Q96EQ8 232 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 SAMD8Q96LT4 415 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 WWTR1Q9GZV5 400 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 HMX1Q9NP08 348 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-209ENST00000639244 FZD3Q9NPG1 666 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 MARK1Q9P0L2 795 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 KLHL21Q9UJP4 597 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 AUP1Q9Y679 476 aa4.16□□□□□ -1.74
SCN3A-209ENST00000639244 LRCH4O75427 683 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 C4BPAP04003 597 aaKnown RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 PET100P0DJ07 73 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 DRD5P21918 477 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SSTR2P30874 369 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 CASRP41180 1078 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 NAPAP54920 295 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 RAP1BP61224 184 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF200P98182 395 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TNFRSF9Q07011 255 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SNAPC1Q16533 368 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 MAN2A1Q16706 1144 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 COL23A1Q86Y22 540 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 PACRGLQ8N7B6 248 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 OR9Q1Q8NGQ5 310 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 GCDHQ92947 438 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TLCD1Q96CP7 247 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 HTATIP2Q9BUP3 242 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ESRP2Q9H6T0 727 aaKnown RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 C11orf16Q9NQ32 467 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 LYARQ9NX58 379 aaKnown RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF223Q9UK11 482 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SLC27A6Q9Y2P4 619 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 EFCAB5A4FU69 1503 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TPST1O60507 370 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 GADD45GO95257 159 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 RHOP08100 348 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SOAT1P35610 550 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 MAGEA3P43357 314 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 HSPA7P48741 367 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SOX10P56693 466 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 WNT7BP56706 349 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 VPS26BQ4G0F5 336 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SPATA46Q5T0L3 261 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TTC23Q5W5X9 447 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 REP15Q6BDI9 236 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF529Q6P280 563 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 LIPIQ6XZB0 460 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ADCK2Q7Z695 626 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 CLNKQ7Z7G1 428 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF280BQ86YH2 543 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 RDH10Q8IZV5 341 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 DAW1Q8N136 415 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 COQ8AQ8NI60 647 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SCARB1Q8WTV0 552 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SLC22A17Q8WUG5 538 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 HAVCR1Q96D42 359 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZNF385AQ96PM9 386 aaKnown RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 KCNA7Q96RP8 456 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 STACQ99469 402 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 PAK5Q9P286 719 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 EXPH5Q8NEV8 1989 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TCRBV21S2A2A0A5A6 115 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TEX46H3BTG2 121 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ACKR2O00590 384 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 NFIBO00712 420 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 LEFTY1O75610 366 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 PITPNAQ00169 270 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 SP2Q02086 613 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TBCEQ15813 527 aaPredicted RBP4.15□□□□□ -1.74
SCN3A-209ENST00000639244 GPR153Q6NV75 609 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ADGRD1Q6QNK2 874 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 MOXD1Q6UVY6 613 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TMIGD1Q6UXZ0 262 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ZPBP2Q6X784 338 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ADGRA1Q86SQ6 560 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 ANGPTL5Q86XS5 388 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 BATF2Q8N1L9 274 aa4.15□□□□□ -1.74
SCN3A-209ENST00000639244 TMEM104Q8NE00 496 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms