RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TAMM41Q96BW9 452 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 COG8Q96MW5 612 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 EPYCQ99645 322 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 C1QTNF2Q9BXJ5 285 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 ABCG4Q9H172 646 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 SLC6A17Q9H1V8 727 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 XKR8Q9H6D3 395 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 MOSPD1Q9UJG1 213 aa20.53■□□□□ 0.88
CLN6-224ENST00000638076 PTGES3LE9PB15 166 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 CAPN5O15484 640 aaPredicted RBP20.52■□□□□ 0.88
CLN6-224ENST00000638076 OR1F1O43749 312 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 KRT75O95678 551 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 ALDH9A1P49189 494 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 CDK6Q00534 326 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 KEAP1Q14145 624 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 DCUN1D5Q9BTE7 237 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 SLC17A9Q9BYT1 436 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 RAD21L1Q9H4I0 556 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 CXorf36Q9H7Y0 433 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 NDUFAF4Q9P032 175 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 PCDHGB3Q9Y5G1 929 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 GMPPBQ9Y5P6 360 aa20.52■□□□□ 0.88
CLN6-224ENST00000638076 M0QX08 132 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 CEACAM5P06731 702 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 MATN1P21941 496 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 TNFRSF4P43489 277 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 EEF1A2Q05639 463 aaKnown RBP20.52■□□□□ 0.87
CLN6-224ENST00000638076 ADCK2Q7Z695 626 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 PLD3Q8IV08 490 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 CNDP2Q96KP4 475 aaKnown RBP20.52■□□□□ 0.87
CLN6-224ENST00000638076 CAMK1GQ96NX5 476 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 LHX9Q9NQ69 397 aa20.52■□□□□ 0.87
CLN6-224ENST00000638076 ATG2BQ96BY7 2078 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 PLRG1O43660 514 aaKnown RBP20.51■□□□□ 0.87
CLN6-224ENST00000638076 LCMT2O60294 686 aaKnown RBP20.51■□□□□ 0.87
CLN6-224ENST00000638076 SEC14L2O76054 403 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 UQCRC2P22695 453 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 EPHA2P29317 976 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 SERPINB1P30740 379 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 OR1E2P47887 323 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 RXRGP48443 463 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 RPS6KA3P51812 740 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 CLCA4Q14CN2 919 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 FAHD1Q6P587 224 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 LZICQ8WZA0 190 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 MRPL38Q96DV4 380 aaKnown RBP20.51■□□□□ 0.87
CLN6-224ENST00000638076 TIMM29Q9BSF4 260 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 NLNQ9BYT8 704 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 LHPPQ9H008 270 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 BTBD1Q9H0C5 482 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 NT5DC2Q9H857 520 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 FZD3Q9NPG1 666 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 SLAMF7Q9NQ25 335 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 PAK1IP1Q9NWT1 392 aaPredicted RBP20.51■□□□□ 0.87
CLN6-224ENST00000638076 LMCD1Q9NZU5 365 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 TESMINQ9Y4I5 508 aa20.51■□□□□ 0.87
CLN6-224ENST00000638076 XPNPEP2O43895 674 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 ANGPTL1O95841 491 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 MAT2AP31153 395 aaKnown RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 MAGEA10P43363 369 aaPredicted RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 CSNK1G2P78368 415 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 GRSF1Q12849 480 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLN6-224ENST00000638076 HEPACAMQ14CZ8 416 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 ZNF630Q2M218 657 aaPredicted RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 IFI44LQ53G44 452 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 CCDC80Q76M96 950 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 ZNF566Q969W8 418 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 PITHD1Q9GZP4 211 aaPredicted RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 EPS8L2Q9H6S3 715 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 C5AR2Q9P296 337 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 AASSQ9UDR5 926 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 IGKV1-8A0A0C4DH67 115 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 A0A1B0GVG6 124 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 TMX2-CTNND1H3BSU7 103 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 NDUFS4O43181 175 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 RNGTTO60942 597 aaKnown RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 CCDC159P0C7I6 412 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 CDK4P11802 303 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 IGFALSP35858 605 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 RAB28P51157 221 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 NUP107P57740 925 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 TMEM196Q5HYL7 178 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 KIAA1161Q6NSJ0 714 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 FAM124AQ86V42 546 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 NUDT13Q86X67 352 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 QRFPRQ96P65 431 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 NDRG4Q9ULP0 352 aaKnown RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 SLC17A4Q9Y2C5 497 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 WBP11Q9Y2W2 641 aaKnown RBP20.5■□□□□ 0.87
CLN6-224ENST00000638076 GPSM3Q9Y4H4 160 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 PLXND1Q9Y4D7 1925 aa20.5■□□□□ 0.87
CLN6-224ENST00000638076 OR52A4PA6NMU1 304 aa20.49■□□□□ 0.87
CLN6-224ENST00000638076 ADAMDEC1O15204 470 aa20.49■□□□□ 0.87
CLN6-224ENST00000638076 DNTTP04053 509 aa20.49■□□□□ 0.87
CLN6-224ENST00000638076 ARAFP10398 606 aa20.49■□□□□ 0.87
CLN6-224ENST00000638076 MANFP55145 182 aaKnown RBP20.49■□□□□ 0.87
CLN6-224ENST00000638076 PRDX1Q06830 199 aaKnown RBP20.49■□□□□ 0.87
CLN6-224ENST00000638076 ELOAQ14241 798 aaKnown RBP20.49■□□□□ 0.87
CLN6-224ENST00000638076 KRT33BQ14525 404 aa20.49■□□□□ 0.87
CLN6-224ENST00000638076 CYP27C1Q4G0S4 372 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms