RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SORBS1Q9BX66 1292 aaKnown RBP16.6■□□□□ 0.25
PNKP-230ENST00000638016 CAPS2Q9BXY5 557 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 CDCP1Q9H5V8 836 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 KLHL1Q9NR64 748 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 OSGIN2Q9Y236 505 aa16.6■□□□□ 0.25
PNKP-230ENST00000638016 A0A087X1B8 175 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 GABRR3A8MPY1 467 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 K7EPI3 171 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 SAP18O00422 153 aaKnown RBP16.59■□□□□ 0.25
PNKP-230ENST00000638016 PRAMEF2O60811 474 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 LDLRP01130 860 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 PCNAP12004 261 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 GP1BBP13224 206 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 CD96P40200 585 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 RAB38P57729 211 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 AP2B1P63010 937 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 MEP1AQ16819 746 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 SPINK14Q6IE38 97 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 MDS2Q8NDY4 140 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
PNKP-230ENST00000638016 ZNF354BQ96LW1 612 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 EFCAB11Q9BUY7 163 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 MS4A8Q9BY19 250 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 VPS11Q9H270 941 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 OPTCQ9UBM4 332 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
PNKP-230ENST00000638016 TEKT2Q9UIF3 430 aa16.59■□□□□ 0.25
PNKP-230ENST00000638016 B3GALT2O43825 422 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 MYO1DO94832 1006 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 SIX3O95343 332 aaPredicted RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 TGFB1P01137 390 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 CTAGE8P0CG41 777 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 EDN3P14138 238 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PHBP35232 272 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 SERPINB8P50452 374 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 LIM2P55344 173 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 DDX39BQ13838 428 aaKnown RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 E2F2Q14209 437 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 SETDB1Q15047 1291 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 OR1C1Q15619 314 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PFKFB4Q16877 469 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 ZNF766Q5HY98 468 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 TRIM40Q6P9F5 258 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 RELL1Q8IUW5 271 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 CTAGE4Q8IX94 777 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 SLC5A8Q8N695 610 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 SLC44A1Q8WWI5 657 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 NR4A3Q92570 626 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PAFAH2Q99487 392 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 FMO2Q99518 471 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PITHD1Q9GZP4 211 aaPredicted RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 PRM3Q9NNZ6 103 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PRTFDC1Q9NRG1 225 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 PNO1Q9NRX1 252 aaKnown RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 CPSF2Q9P2I0 782 aaKnown RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 PLEKHB1Q9UF11 243 aaPredicted RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 ZNF223Q9UK11 482 aaPredicted RBP16.58■□□□□ 0.24
PNKP-230ENST00000638016 SLC5A6Q9Y289 635 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 MYO7BQ6PIF6 2116 aa16.58■□□□□ 0.24
PNKP-230ENST00000638016 CYR61O00622 381 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 KLHL2O95198 593 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 RASAL1O95294 804 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 CLDN1O95832 211 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 GFAPP14136 432 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 COL8A1P27658 744 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 GSTM2P28161 218 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 TPP2P29144 1249 aaPredicted RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 TYK2P29597 1187 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 MTTPP55157 894 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 ID2Q02363 134 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 OC90Q02509 493 aaPredicted RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 TBCCQ15814 346 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 TECRLQ5HYJ1 363 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 PAGE2BQ5JRK9 111 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 MYLK4Q86YV6 388 aaPredicted RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 APCDD1LQ8NCL9 501 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 OR7G3Q8NG95 312 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 RHEBL1Q8TAI7 183 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 THAP3Q8WTV1 239 aaPredicted RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 SERINC2Q96SA4 455 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 MAPKAP1Q9BPZ7 522 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 FUT8Q9BYC5 575 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 OR51B5Q9H339 312 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 CLK4Q9HAZ1 481 aaKnown RBP16.57■□□□□ 0.24
PNKP-230ENST00000638016 DAPP1Q9UN19 280 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 MMACHCQ9Y4U1 282 aa16.57■□□□□ 0.24
PNKP-230ENST00000638016 TRBV11-1A0A0K0K1C0 115 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 POC1B-GALNT4F8VUJ3 575 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 PRKNO60260 465 aaPredicted RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 NEURL1O76050 574 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 CASP2P42575 452 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 PIK3CGP48736 1102 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 TAS2R50P59544 299 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 SLC13A2Q13183 592 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 LAPTM5Q13571 262 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 NAA30Q147X3 362 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms