RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ESR1P03372 595 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 RNH1P13489 461 aaKnown RBP16.74■□□□□ 0.27
CLN6-212ENST00000636020 GRK3P35626 688 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 TBPL1P62380 186 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 PWP1Q13610 501 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 C11orf63Q6NUN7 778 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 PPHLN1Q8NEY8 458 aaKnown RBP16.74■□□□□ 0.27
CLN6-212ENST00000636020 PPP1R14CQ8TAE6 165 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 ISL2Q96A47 359 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 SGCZQ96LD1 299 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 PCBD2Q9H0N5 130 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 PNO1Q9NRX1 252 aaKnown RBP16.74■□□□□ 0.27
CLN6-212ENST00000636020 TREX1Q9NSU2 369 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
CLN6-212ENST00000636020 NPFFR2Q9Y5X5 522 aa16.74■□□□□ 0.27
CLN6-212ENST00000636020 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.74■□□□□ 0.27
CLN6-212ENST00000636020 SH3D21A4FU49 640 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 EEF1E1-BLOC1S5C9J1V9 151 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 EEF1E1O43324 174 aaKnown RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 ZBTB14O43829 449 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 ZNF888P0CJ79 500 aaPredicted RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 CCL3P10147 92 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 PPP2R1BP30154 601 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 CTNNA1P35221 906 aaKnown RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 AGFG1P52594 562 aaKnown RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 ADARP55265 1226 aaKnown RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 C17orf64Q86WR6 236 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 NEIL3Q8TAT5 605 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 SLC30A3Q99726 388 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 SLC6A15Q9H2J7 730 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 ETNK1Q9HBU6 452 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 ACKR4Q9NPB9 350 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 EIF3LQ9Y262 564 aaKnown RBP16.73■□□□□ 0.27
CLN6-212ENST00000636020 MMACHCQ9Y4U1 282 aa16.73■□□□□ 0.27
CLN6-212ENST00000636020 ZNF354AO60765 605 aaPredicted RBP16.72■□□□□ 0.27
CLN6-212ENST00000636020 P04436 131 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 RFPL3SP0C7P2 107 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 HK2P52789 917 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 SIX1Q15475 284 aaPredicted RBP16.72■□□□□ 0.27
CLN6-212ENST00000636020 PCID2Q5JVF3 399 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 HEPHL1Q6MZM0 1159 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 SPNS2Q8IVW8 549 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 PRELID2Q8N945 189 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
CLN6-212ENST00000636020 CCL19Q99731 98 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 WDR83Q9BRX9 315 aaKnown RBP16.72■□□□□ 0.27
CLN6-212ENST00000636020 RHBGQ9H310 441 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 ZNF703Q9H7S9 590 aaPredicted RBP16.72■□□□□ 0.27
CLN6-212ENST00000636020 CRYL1Q9Y2S2 319 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 CLDN16Q9Y5I7 305 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 NCKAP5O14513 1909 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 DSCAMO60469 2012 aa16.72■□□□□ 0.27
CLN6-212ENST00000636020 TGFBR3LH3BV60 316 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 CASKO14936 926 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 FREM3P0C091 2139 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 MPC1LP0DKB6 136 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 CDH1P12830 882 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 FPR1P21462 350 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 CTSSP25774 331 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 ARNTP27540 789 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 PIGAP37287 484 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 CLCN7P51798 805 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 ACKR1Q16570 336 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 NSUN5P2Q63ZY6 315 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 ABHD13Q7L211 337 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 SDCCAG8Q86SQ7 713 aaPredicted RBP16.71■□□□□ 0.27
CLN6-212ENST00000636020 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 OTUD6BQ8N6M0 293 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 NT5CQ8TCD5 201 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 SREK1Q8WXA9 508 aaKnown RBP16.71■□□□□ 0.27
CLN6-212ENST00000636020 GSX2Q9BZM3 304 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 ABCA1O95477 2261 aa16.71■□□□□ 0.27
CLN6-212ENST00000636020 E5RI56 91 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 OR1F1O43749 312 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 AVILO75366 819 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 MBD3O95983 291 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 IL18BPO95998 194 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 SERPIND1P05546 499 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 NMBRP28336 390 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 OPRM1P35372 400 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 CETN2P41208 172 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 TRPC1P48995 793 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
CLN6-212ENST00000636020 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
CLN6-212ENST00000636020 MRNIPQ6NTE8 343 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 HSDL2Q6YN16 418 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 LRRC25Q8N386 305 aaPredicted RBP16.7■□□□□ 0.26
CLN6-212ENST00000636020 ABHD11Q8NFV4 315 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 OR4K1Q8NGD4 311 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 GIMAP7Q8NHV1 300 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 SLC35B2Q8TB61 432 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 HSPBAP1Q96EW2 488 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 TCF12Q99081 682 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 RBM24Q9BX46 236 aaKnown RBP16.7■□□□□ 0.26
CLN6-212ENST00000636020 IFNKQ9P0W0 207 aa16.7■□□□□ 0.26
CLN6-212ENST00000636020 WIPF1O43516 503 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms