RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 GALNT7Q86SF2 657 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 IQCHQ86VS3 1027 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 CYP4Z1Q86W10 505 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 DCUN1D3Q8IWE4 304 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 MSRB3Q8IXL7 192 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 UBE2J2Q8N2K1 259 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ZNF548Q8NEK5 533 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 DDHD1Q8NEL9 900 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 HM13Q8TCT9 377 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 WFIKKN2Q8TEU8 576 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 C16orf78Q8WTQ4 265 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 PDLIM5Q96HC4 596 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 GPATCH1Q9BRR8 931 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 RLIMQ9NVW2 624 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ERVK-18Q9QC07 812 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RPS6KA6Q9UK32 745 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 BLOC1S6Q9UL45 172 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 OR6C74A6NCV1 312 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 LIN7AO14910 233 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 LDB3O75112 727 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SCELO95171 688 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RPN2P04844 631 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 CCT3P49368 545 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 VBP1P61758 197 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 MINDY4Q4G0A6 757 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 CCNJQ5T5M9 372 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ZNF776Q68DI1 518 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 PRR23BQ6ZRT6 265 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 Q6ZS52 159 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 LGI4Q8N135 537 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 MARVELD2Q8N4S9 558 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 IQCF1Q8N6M8 205 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SPACA7Q96KW9 195 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 EFCAB11Q9BUY7 163 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SLC29A3Q9BZD2 475 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 REEP4Q9H6H4 257 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ZDHHC7Q9NXF8 308 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 TAS2R16Q9NYV7 291 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 MAT2BQ9NZL9 334 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 REV3LO60673 3130 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 H3BNH8 94 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SCAMP2O15127 329 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 PDPK1O15530 556 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 B4GALT2O60909 372 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 WISP3O95389 354 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 IGFBP1P08833 259 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 CDH2P19022 906 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 TGFBR1P36897 503 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ARL4DP49703 201 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ENTPD1P49961 510 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ALDH3A2P51648 485 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 CLCN2P51788 898 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 HTRA4P83105 476 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 GRSF1Q12849 480 aaKnown RBP eCLIP7.18□□□□□ -1.26
PKP4-217ENST00000628904 TARDBPQ13148 414 aaKnown RBP eCLIP7.18□□□□□ -1.264e-7■■■■■ 29.4
PKP4-217ENST00000628904 RAB39AQ14964 217 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RFX4Q33E94 735 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 TOR1AIP1Q5JTV8 583 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 BROXQ5VW32 411 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 C18orf63Q68DL7 685 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SLCO4C1Q6ZQN7 724 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 SHFQ7M4L6 423 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 C10orf53Q8N6V4 93 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 OR52E1Q8NGJ3 308 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 ZUFSPQ96AP4 578 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 OTUB2Q96DC9 234 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 NODALQ96S42 347 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 TBX5Q99593 518 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RBM4BQ9BQ04 359 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 CHCHD6Q9BRQ6 235 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RBM4Q9BWF3 364 aaKnown RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 BTBD1Q9H0C5 482 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 RSPH9Q9H1X1 276 aaPredicted RBP7.18□□□□□ -1.26
PKP4-217ENST00000628904 GIMAP4Q9NUV9 329 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 VNN3Q9NY84 501 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 TVP23BQ9NYZ1 205 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
PKP4-217ENST00000628904 A0A096LPI6 279 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 TRBV5-4A0A0C4DH59 114 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 GADD45GO95257 159 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CKMT1AP12532 417 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 LAMP2P13473 410 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 C21orf33P30042 268 aaPredicted RBP7.17□□□□□ -1.26
PKP4-217ENST00000628904 PPP2R1BP30154 601 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 NTSP30990 170 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 OPRD1P41143 372 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ASMTP46597 345 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 MAP4K2Q12851 820 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 CLCA4Q14CN2 919 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 HEPACAMQ14CZ8 416 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 ATP6AP1Q15904 470 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 SYPL1Q16563 259 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 LIPJQ5W064 366 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 GALNT18Q6P9A2 607 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 TECPR1Q7Z6L1 1165 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 OOSP2Q86WS3 158 aa7.17□□□□□ -1.26
PKP4-217ENST00000628904 FAM9CQ8IZT9 166 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms