RNA–Protein interactions for RNA: ENST00000628401.1

NPTN-IT1-201, NPTN intronic transcript 1, humanhuman

BASIC

Gene NPTN-IT1, Length 2,283 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-IT1-201ENST00000628401 METAP1P53582 386 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CLDN8P56748 225 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RPS14P62263 151 aaKnown RBP12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HMGCS1Q01581 520 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TBRG1Q3YBR2 411 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RGL4Q8IZJ4 473 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC38A4Q969I6 547 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NXPE3Q969Y0 559 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ULK4Q96C45 1275 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RIOK2Q9BVS4 552 aaKnown RBP12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SERHLQ9NQF3 203 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC6A13Q9NSD5 602 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ARL15Q9NXU5 204 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HCN4Q9Y3Q4 1203 aa12.89□□□□□ -0.35
NPTN-IT1-201ENST00000628401 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MANBAO00462 879 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CISD3P0C7P0 127 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 BCKDHAP12694 445 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HLA-EP13747 358 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FOSL1P15407 271 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HOXB9P17482 250 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ALOX12P18054 663 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TGFBR2P37173 567 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 IL12RB1P42701 662 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC6A11P48066 632 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RPIAP49247 311 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 IL1RL1Q01638 556 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GTF2H3Q13889 308 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 C9orf50Q5SZB4 431 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CEP68Q76N32 757 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SFTPA1Q8IWL2 248 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DNAJC5GQ8N7S2 189 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 UBTD2Q8WUN7 234 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SNAPC3Q92966 411 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PLSCR3Q9NRY6 295 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 EIF3KQ9UBQ5 218 aaKnown RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 IGLV3-16A0A075B6K0 115 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 UGT2B17O75795 530 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SEMA3DO95025 777 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PRPS2P11908 318 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CYP4B1P13584 511 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 AOAHP28039 575 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 UGT2B15P54855 530 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 C10orf111Q8N326 155 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FAM83FQ8NEG4 500 aaPredicted RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PITX2Q99697 317 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 WRAP53Q9BUR4 548 aaKnown RBP12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
NPTN-IT1-201ENST00000628401 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PRRT4C9JH25 899 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FABP3P05413 133 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZNF30P17039 623 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GGT5P36269 586 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CBX5P45973 191 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CLK1P49759 484 aaKnown RBP12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GPAT3Q53EU6 434 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZNF805Q5CZA5 627 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FAM78AQ5JUQ0 283 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZDHHC20Q5W0Z9 365 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TCTE3Q8IZS6 198 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ELMO1Q92556 727 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PYCR2Q96C36 320 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 REXO4Q9GZR2 422 aaKnown RBP12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NIPAL2Q9H841 368 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KRT84Q9NSB2 600 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PDP1Q9P0J1 537 aaPredicted RBP12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TRAPPC4Q9Y296 219 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PCDHGB2Q9Y5G2 931 aa12.87□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TRANK1O15050 2925 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms