RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ACTR1BP42025 376 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 RXRGP48443 463 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 IST1P53990 364 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 ACTR1AP61163 376 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 TUBA4AP68366 448 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 COX20Q5RI15 118 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 ZNF425Q6IV72 752 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 TTC33Q6PID6 262 aaPredicted RBP21.01■□□□□ 0.95
PNKP-220ENST00000627232 SPESP1Q6UW49 350 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 ANGPTL8Q6UXH0 198 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 CCDC80Q76M96 950 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 RD3Q7Z3Z2 195 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 MFSD9Q8NBP5 474 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 HMGB4Q8WW32 186 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 TUBA8Q9NY65 449 aaPredicted RBP21.01■□□□□ 0.95
PNKP-220ENST00000627232 SPHK1Q9NYA1 384 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 RAPGEFL1Q9UHV5 662 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 KLF15Q9UIH9 416 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 BAG5Q9UL15 447 aa21.01■□□□□ 0.95
PNKP-220ENST00000627232 MAGED1Q9Y5V3 778 aaPredicted RBP21.01■□□□□ 0.95
PNKP-220ENST00000627232 MYOCOSA0A1B0GUC4 107 aa21■□□□□ 0.95
PNKP-220ENST00000627232 TRIM64A6NGJ6 449 aa21■□□□□ 0.95
PNKP-220ENST00000627232 HAT1O14929 419 aa21■□□□□ 0.95
PNKP-220ENST00000627232 EML2O95834 649 aa21■□□□□ 0.95
PNKP-220ENST00000627232 ASGR2P07307 311 aa21■□□□□ 0.95
PNKP-220ENST00000627232 SSR2P43308 183 aa21■□□□□ 0.95
PNKP-220ENST00000627232 PCBP4P57723 403 aaKnown RBP21■□□□□ 0.95
PNKP-220ENST00000627232 ZNF630Q2M218 657 aaPredicted RBP21■□□□□ 0.95
PNKP-220ENST00000627232 ALG11Q2TAA5 492 aa21■□□□□ 0.95
PNKP-220ENST00000627232 RFX4Q33E94 735 aa21■□□□□ 0.95
PNKP-220ENST00000627232 TTC23Q5W5X9 447 aa21■□□□□ 0.95
PNKP-220ENST00000627232 ISLR2Q6UXK2 745 aa21■□□□□ 0.95
PNKP-220ENST00000627232 TMEM179BQ7Z7N9 219 aa21■□□□□ 0.95
PNKP-220ENST00000627232 FBXL6Q8N531 539 aa21■□□□□ 0.95
PNKP-220ENST00000627232 OR10Q1Q8NGQ4 319 aa21■□□□□ 0.95
PNKP-220ENST00000627232 SLC22A18Q96BI1 424 aa21■□□□□ 0.95
PNKP-220ENST00000627232 NRBF2Q96F24 287 aa21■□□□□ 0.95
PNKP-220ENST00000627232 PHF7Q9BWX1 381 aaPredicted RBP21■□□□□ 0.95
PNKP-220ENST00000627232 AICDAQ9GZX7 198 aa21■□□□□ 0.95
PNKP-220ENST00000627232 TWSG1Q9GZX9 223 aa21■□□□□ 0.95
PNKP-220ENST00000627232 TMEM168Q9H0V1 697 aa21■□□□□ 0.95
PNKP-220ENST00000627232 NEUROD4Q9HD90 331 aa21■□□□□ 0.95
PNKP-220ENST00000627232 ACSS1Q9NUB1 689 aaPredicted RBP21■□□□□ 0.95
PNKP-220ENST00000627232 EHD3Q9NZN3 535 aa21■□□□□ 0.95
PNKP-220ENST00000627232 MYO10Q9HD67 2058 aa21■□□□□ 0.95
PNKP-220ENST00000627232 ISM1B1AKI9 464 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PRAMEF26H0Y7S4 382 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 MAN2B1O00754 1011 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SUV39H1O43463 412 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 RASGRP1O95267 797 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SERPIND1P05546 499 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SRFP11831 508 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 F3P13726 295 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SOAT1P35610 550 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 RABIFP47224 123 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ALDH9A1P49189 494 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PRIM2P49643 509 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 DGKEP52429 567 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 HYAL2Q12891 473 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SCARB2Q14108 478 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 MLC1Q15049 377 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SLC5A12Q1EHB4 618 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 KIAA0895LQ68EN5 471 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ABI3BPQ7Z7G0 1075 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SRFBP1Q8NEF9 429 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 MAL2Q969L2 176 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 TEFMQ96QE5 360 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 DOHHQ9BU89 302 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PRO3102Q9H379 93 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 CXorf36Q9H7Y0 433 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SMURF2Q9HAU4 748 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ABCG2Q9UNQ0 655 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PCDHGA4Q9Y5G9 962 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PCDHGA2Q9Y5H1 932 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 DGKBQ9Y6T7 804 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 FANCMQ8IYD8 2048 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 REV3LO60673 3130 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 TRIM64CA6NLI5 447 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 GCM2O75603 506 aaPredicted RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 FKBP9O95302 570 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ARAFP10398 606 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ATP6V1B1P15313 513 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 TSFMP43897 325 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 ARHGDIAP52565 204 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 CRYBA2P53672 197 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 MANFP55145 182 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 ITGA1P56199 1179 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 EEF1A2Q05639 463 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 ZC3H12BQ5HYM0 836 aaKnown RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 TMEM31Q5JXX7 168 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 KIAA1614Q5VZ46 1190 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SAXO2Q658L1 398 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SLC30A9Q6PML9 568 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 Q6ZSR6 202 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 TMEM26Q6ZUK4 368 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 VTCN1Q7Z7D3 282 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 GALNT10Q86SR1 603 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SATL1Q86VE3 508 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 RNF130Q86XS8 419 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ZNF786Q8N393 782 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms