RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TIA1P31483 386 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 DPTQ07507 201 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 RBBP4Q09028 425 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TRIM16LQ309B1 348 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF805Q5CZA5 627 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 XKR6Q5GH73 641 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CRB2Q5IJ48 1285 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 KIAA1614Q5VZ46 1190 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 AGTRAPQ6RW13 159 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 P3H2Q8IVL5 708 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 MFSD4AQ8N468 514 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CELF2-AS1Q8N7Q2 184 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CNIH3Q8TBE1 160 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 PKP4Q99569 1192 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CCM2Q9BSQ5 444 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 MYNNQ9NPC7 610 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SLCO3A1Q9UIG8 710 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SLC27A6Q9Y2P4 619 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SAMHD1Q9Y3Z3 626 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CORINQ9Y5Q5 1042 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 C17orf113A0A1B0GUU1 675 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CFAP99D6REC4 459 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 NDUFS2O75306 463 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 C1orf105O95561 183 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 LAMP1P11279 417 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 POLR2EP19388 210 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 UGT2B10P36537 528 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ACSM2AQ08AH3 577 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 GAB1Q13480 694 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 IRF3Q14653 427 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TEAD4Q15561 434 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SF1Q15637 639 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ACSM2BQ68CK6 577 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 C19orf48Q6RUI8 117 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 Q6ZVU0 165 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ABHD11Q8NFV4 315 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 OR7G3Q8NG95 312 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 CHAC2Q8WUX2 184 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 GLYATL1Q969I3 302 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SH3YL1Q96HL8 342 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 DUSP26Q9BV47 211 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ROGDIQ9GZN7 287 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 AMBNQ9NP70 447 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 SPASTQ9UBP0 616 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF282Q9UDV7 671 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 NDOR1Q9UHB4 597 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 OSGIN1Q9UJX0 560 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 FBXL21Q9UKT6 434 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 PCDHGA6Q9Y5G7 932 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 GMPPBQ9Y5P6 360 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 BDP1A6H8Y1 2624 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TCF20Q9UGU0 1960 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 MITFO75030 526 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 FAM20BO75063 409 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ANGPTL1O95841 491 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 FADS2O95864 444 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 IL9P15248 144 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF8P17098 575 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ACADLP28330 430 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 GRK3P35626 688 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 FRKP42685 505 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 MPEG1Q2M385 716 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 LIPIQ6XZB0 460 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 IKBIPQ70UQ0 350 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF554Q86TJ5 538 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 PLD3Q8IV08 490 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF540Q8NDQ6 660 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 NECAB3Q96P71 396 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 DOHHQ9BU89 302 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TPT1P8Q9HAU6 139 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 ACOT13Q9NPJ3 140 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 PDP1Q9P0J1 537 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 TBC1D14Q9P2M4 693 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 KCND3Q9UK17 655 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 A3GALT2U3KPV4 340 aa6.87□□□□□ -1.31
CTNNA1-244ENST00000627109 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DSPPQ9NZW4 1301 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 MGAT4DA6NG13 374 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 HNRNPA1P09651 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CEBPBP17676 345 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 PIK3CBP42338 1070 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CD97P48960 835 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SELENOWP63302 87 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 STARD3Q14849 445 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF648Q5T619 568 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 FAM71E1Q6IPT2 247 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ENTHD1Q8IYW4 607 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CLECL1Q8IZS7 167 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SLC15A4Q8N697 577 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 MINDY2Q8NBR6 621 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SCAMP4Q969E2 229 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms