RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF592Q92610 1267 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 NXNL1Q96CM4 212 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 QRFPRQ96P65 431 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SIGLEC12Q96PQ1 595 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SERINC2Q96SA4 455 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 ATOH8Q96SQ7 321 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 DEFB126Q9BYW3 111 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 ROGDIQ9GZN7 287 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 COPS7BQ9H9Q2 264 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-215ENST00000625926 PRM3Q9NNZ6 103 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 PRTFDC1Q9NRG1 225 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 OPTCQ9UBM4 332 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MRPS33Q9Y291 106 aaKnown RBP10.15□□□□□ -0.78
SSBP4-215ENST00000625926 ASB1Q9Y576 335 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 TNRC6AQ8NDV7 1962 aaKnown RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SEC16AO15027 2179 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 K7EPI3 171 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 UBXN8O00124 270 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 UNC5CO95185 931 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 EPB42P16452 691 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MST1P26927 711 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 TYK2P29597 1187 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 EEF1DP29692 281 aaKnown RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MSH2P43246 934 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 CLCN2P51788 898 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 LIM2P55344 173 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 KCNK10P57789 538 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 PCDH1Q08174 1060 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SLC13A2Q13183 592 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 BMPR2Q13873 1038 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 E2F2Q14209 437 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 ACAP2Q15057 778 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 TERF2Q15554 542 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 UAP1Q16222 522 aaPredicted RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM35AQ53FP2 167 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 ADNP2Q6IQ32 1131 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SLC25A25Q6KCM7 469 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MED27Q6P2C8 311 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 KLC3Q6P597 504 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 CHSY3Q70JA7 882 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MAMDC2Q7Z304 686 aaPredicted RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SCUBE1Q8IWY4 988 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 LAS2Q8IYD9 372 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 TMEM178AQ8NBL3 297 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 NFAM1Q8NET5 270 aaPredicted RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 B3GNT7Q8NFL0 401 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF473Q8WTR7 871 aaKnown RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 UBTD2Q8WUN7 234 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 KCTD4Q8WVF5 259 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 KCNC2Q96PR1 638 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 F2RL3Q96RI0 385 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 TBCDQ9BTW9 1192 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 ACSS3Q9H6R3 686 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 KLHL1Q9NR64 748 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SNX15Q9NRS6 342 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 PNO1Q9NRX1 252 aaKnown RBP10.14□□□□□ -0.79
SSBP4-215ENST00000625926 NINJ2Q9NZG7 142 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 LRFN1Q9P244 771 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 SEC14L3Q9UDX4 400 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 DAPP1Q9UN19 280 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 MED13Q9UHV7 2174 aa10.14□□□□□ -0.79
SSBP4-215ENST00000625926 FER1L5A0AVI2 2057 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 A0A096LPK6 155 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 HMX2A2RU54 273 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SYNDIG1LA6NDD5 238 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CYR61O00622 381 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 FCHO1O14526 889 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CTNSO60931 367 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 NEURL1O76050 574 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 MYO1DO94832 1006 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 KLHL2O95198 593 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 MLYCDO95822 493 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CLDN1O95832 211 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 TUBB4AP04350 444 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SP1P08047 785 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 PCNAP12004 261 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 MTHFD2P13995 350 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 GFAPP14136 432 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CERS1P27544 350 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 TPP2P29144 1249 aaPredicted RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SERPINB1P30740 379 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CYB561P49447 251 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 ST13P50502 369 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 MLF1P58340 268 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 IRF9Q00978 393 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 PMP22Q01453 160 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 SRSF11Q05519 484 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 RBPJQ06330 500 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 PFKFB4Q16877 469 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 AP5B1Q2VPB7 878 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 GLE1Q53GS7 698 aaKnown RBP10.13□□□□□ -0.79
SSBP4-215ENST00000625926 HIST2H2BCQ6DN03 193 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 UBE3DQ7Z6J8 389 aa10.13□□□□□ -0.79
SSBP4-215ENST00000625926 CENPLQ8N0S6 344 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms