RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PSIP1O75475 530 aaKnown RBP7.35□□□□□ -1.23
CLK1-215ENST00000621181 VAPBO95292 243 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ESR1P03372 595 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 TPOP07202 933 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 DHRS4L1P0CG22 281 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 NMBRP28336 390 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 SNRPNP63162 240 aaKnown RBP7.35□□□□□ -1.23
CLK1-215ENST00000621181 GUCA2AQ02747 115 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 TAP2Q03519 686 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 PDIA2Q13087 525 aaKnown RBP7.35□□□□□ -1.23
CLK1-215ENST00000621181 GBX1Q14549 363 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 SFT2D3Q587I9 215 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 SLC25A25Q6KCM7 469 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 PCGF5Q86SE9 256 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 CD163Q86VB7 1156 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 IGDCC3Q8IVU1 814 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ZBED8Q8IZ13 594 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 KIF2BQ8N4N8 673 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 CPSF7Q8N684 471 aaKnown RBP7.35□□□□□ -1.23
CLK1-215ENST00000621181 ACBD4Q8NC06 268 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ZCCHC10Q8TBK6 192 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ZNF480Q8WV37 535 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 DCAKDQ8WVC6 231 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 TMEM125Q96AQ2 219 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 NPAS2Q99743 824 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 MACROD1Q9BQ69 325 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 RBCK1Q9BYM8 510 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 IL22Q9GZX6 179 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 MYLK2Q9H1R3 596 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 LRMDAQ9H2I8 198 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ANKHQ9HCJ1 492 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 SLCO1B3Q9NPD5 702 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 KLHL14Q9P2G3 628 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 PSMC3IPQ9P2W1 217 aaPredicted RBP7.35□□□□□ -1.23
CLK1-215ENST00000621181 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
CLK1-215ENST00000621181 PRRC2AP48634 2157 aaKnown RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 ABCA2Q9BZC7 2435 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 POC1B-GALNT4F8VUJ3 575 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 ADAM10O14672 748 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 NME2P1O60361 137 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 CDC40O60508 579 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLK1-215ENST00000621181 NME2P22392 152 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 PTGER1P34995 402 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 PTGS2P35354 604 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 BCL6P41182 706 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 CYB561P49447 251 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 CCNG1P51959 295 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 RPS15AP62244 130 aaKnown RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 KCNJ11Q14654 390 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 EFTUD2Q15029 972 aaKnown RBP eCLIP7.34□□□□□ -1.234e-8■■■■□ 23.4
CLK1-215ENST00000621181 ACSBG2Q5FVE4 666 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 HP1BP3Q5SSJ5 553 aaPredicted RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 FAM47EQ6ZV65 393 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 SHISA5Q8N114 240 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 LGI4Q8N135 537 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 C4orf33Q8N1A6 199 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
CLK1-215ENST00000621181 BANPQ8N9N5 519 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 LPGAT1Q92604 370 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 ZNF75CPQ92670 426 aaPredicted RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 KLHL29Q96CT2 875 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 SLC7A6OSQ96CW6 309 aaPredicted RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 MFSD3Q96ES6 412 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 PEX11GQ96HA9 241 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 TMEM237Q96Q45 408 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 TREX2Q9BQ50 279 aaPredicted RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 ZNF559Q9BR84 538 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 CDCP1Q9H5V8 836 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 PLAC1Q9HBJ0 212 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 BFARQ9NZS9 450 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 PAK5Q9P286 719 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 USH1CQ9Y6N9 552 aa7.34□□□□□ -1.23
CLK1-215ENST00000621181 ANKHD1Q8IWZ3 2542 aaKnown RBP7.34□□□□□ -1.23
CLK1-215ENST00000621181 A0A1B0GTH9 108 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 FAM90A27PA6NNH2 459 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 RDH16O75452 317 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 CD99P14209 185 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 IGFBP2P18065 325 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 HRH2P25021 359 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ARNTP27540 789 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 SSTR1P30872 391 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 CHRNB4P30926 498 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ETV4P43268 484 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 MAGEA6P43360 314 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ADARP55265 1226 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 ARL4CP56559 192 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 OR4D2P58180 307 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 SLC26A5P58743 744 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 BASP1P80723 227 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 SLC18A2Q05940 514 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 USP10Q14694 798 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 TYSND1Q2T9J0 566 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TTLL9Q3SXZ7 439 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 ZNF468Q5VIY5 522 aaPredicted RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 CES4AQ5XG92 561 aa7.34□□□□□ -1.24
CLK1-215ENST00000621181 TMEM214Q6NUQ4 689 aaKnown RBP7.34□□□□□ -1.24
CLK1-215ENST00000621181 CES3Q6UWW8 571 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms