RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SPANXN4Q5MJ08 99 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 ARHGAP22Q7Z5H3 698 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF283Q8N7M2 679 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 OR2L8Q8NGY9 312 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 BBS10Q8TAM1 723 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 DDX1Q92499 740 aaKnown RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 PYURFQ96I23 114 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 NELL2Q99435 816 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 CADM1Q9BY67 442 aaKnown RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 COMMD3Q9UBI1 195 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 MEMO1Q9Y316 297 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 PRSS51A0A1B0GVH4 220 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF99A8MXY4 864 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 CSTAP01040 98 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 OR12D1P0DN82 309 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 HOXA11P31270 313 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 GJA5P36382 358 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 RORCP51449 518 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 FCHO2Q0JRZ9 810 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 OR2T5Q6IEZ7 315 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 USP43Q70EL4 1123 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 NLGN4XQ8N0W4 816 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 OR2T29Q8NH02 315 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 FCGR1BQ92637 280 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 HSPBAP1Q96EW2 488 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 ALPK1Q96QP1 1244 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 MED28Q9H204 178 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 RHCGQ9UBD6 479 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM5Q9Y2B1 443 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 GRXCR2A6NFK2 248 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 MATN2O00339 956 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 MAFKO60675 156 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 DSC1Q08554 894 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 CATSPEREQ5SY80 951 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 ARL9Q6T311 187 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 LRRC25Q8N386 305 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-219ENST00000620786 C7orf57Q8NEG2 295 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 BORCS8Q96FH0 119 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 CASD1Q96PB1 797 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TRIB3Q96RU7 358 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 NAA11Q9BSU3 229 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-219ENST00000620786 PAK6Q9NQU5 681 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-219ENST00000620786 LATO43561 262 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 HTR1AP08908 422 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 SRYQ05066 204 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 DEFB133Q30KQ1 61 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 THOC7Q6I9Y2 204 aaKnown RBP10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM107Q6UX40 140 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 PEX11GQ96HA9 241 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 MCHR1Q99705 422 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TMED9Q9BVK6 235 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TSSK6Q9BXA6 273 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 ENTPD1P49961 510 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 ARPC4P59998 168 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 DAG1Q14118 895 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TIGD6Q17RP2 521 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 AQP12BA6NM10 295 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 L7N2F9 121 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 EI24O14681 340 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 PTGESO14684 152 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 VILLO15195 856 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 GADD45AP24522 165 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 FOXN2P32314 431 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 CXCL12P48061 93 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 VAMP2P63027 116 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 GSTM4Q03013 218 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 FRMD7Q6ZUT3 714 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 AKAP14Q86UN6 197 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 RAB43Q86YS6 212 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 AQP12AQ8IXF9 295 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 C10orf82Q8WW14 230 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 ASB15Q8WXK1 588 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 OR5P2Q8WZ92 322 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 NINJ1Q92982 152 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM59LQ9UK28 342 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 DLG5Q8TDM6 1919 aa10.95□□□□□ -0.66
CLIP1-219ENST00000620786 COL2A1P02458 1487 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 C1orf226A1L170 272 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MEIS3P2A8K0S8 358 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 SCN1BQ07699 218 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TNFAIP8L3Q5GJ75 292 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 OR4C11Q6IEV9 310 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 REEP3Q6NUK4 255 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TTC9BQ8N6N2 239 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 CHST14Q8NCH0 376 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 BORCS5Q969J3 196 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TMBIM1Q969X1 311 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TRIM36Q9NQ86 728 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 GDE1Q9NZC3 331 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 SEC14L5O43304 696 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 SOX14O95416 240 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 SPARCP09486 303 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 NR0B1P51843 470 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 GRM7Q14831 915 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 CYBRD1Q53TN4 286 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms