RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 KCNC2Q96PR1 638 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CSF3RQ99062 836 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
NEK3-210ENST00000620675 TRPC4Q9UBN4 977 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
NEK3-210ENST00000620675 CNTRLQ7Z7A1 2325 aa12.9□□□□□ -0.35
NEK3-210ENST00000620675 SERTM1A2A2V5 107 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 TERTO14746 1132 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 LSM1O15116 133 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 KLK1P06870 262 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 HBQ1P09105 142 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 TCN2P20062 427 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 PHEXP78562 749 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 DSG2Q14126 1118 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 GALNTL6Q49A17 601 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 CA13Q8N1Q1 262 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 METTL4Q8N3J2 472 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 PEX11GQ96HA9 241 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 SLC45A3Q96JT2 553 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 FAR2Q96K12 515 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 YIPF2Q9BWQ6 316 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 IFT80Q9P2H3 777 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 POLR3HQ9Y535 204 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 A0A0A6YYD5 115 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 URADA6NGE7 173 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 LIPCP11150 499 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 XCR1P46094 333 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 AVPR1BP47901 424 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 HK2P52789 917 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 KIAA0040Q15053 153 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 NR6A1Q15406 480 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 IMPG1Q17R60 797 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 AP5B1Q2VPB7 878 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 SLC9B1Q4ZJI4 515 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 RFTN2Q52LD8 501 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 PRMT9Q6P2P2 845 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 ESX1Q8N693 406 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 GBP7Q8N8V2 638 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 MVB12AQ96EY5 273 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 TBCDQ9BTW9 1192 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
NEK3-210ENST00000620675 KCMF1Q9P0J7 381 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 DLGAP4Q9Y2H0 992 aa12.89□□□□□ -0.35
NEK3-210ENST00000620675 H0YIG0 161 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 SDHDO14521 159 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 EDF1O60869 148 aaKnown RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 PEX11AO75192 247 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 SEMA3DO95025 777 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 CHEK2O96017 543 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 HSD3B1P14060 373 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 TACR1P25103 407 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 HSD3B2P26439 372 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 DLSTP36957 453 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 MTTPP55157 894 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 LIM2P55344 173 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 SLAMF1Q13291 335 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 NKG7Q16617 165 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 C10orf62Q5T681 223 aaPredicted RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 CRLF3Q8IUI8 442 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 ZC3H7AQ8IWR0 971 aaKnown RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 ENDOVQ8N8Q3 282 aaKnown RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 NUDT8Q8WV74 236 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 SOX17Q9H6I2 414 aaPredicted RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 DDX31Q9H8H2 851 aaKnown RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 FGFR1OP2Q9NVK5 253 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 TEX10Q9NXF1 929 aaPredicted RBP12.88□□□□□ -0.35
NEK3-210ENST00000620675 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 MAP4K5Q9Y4K4 846 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 ATG4BQ9Y4P1 393 aa12.88□□□□□ -0.35
NEK3-210ENST00000620675 SCELO95171 688 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 ONECUT2O95948 504 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 CCNYL3P0C7X3 344 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 LIFP15018 202 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 CD82P27701 267 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 EPHA3P29320 983 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 NCF4Q15080 339 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 C18orf63Q68DL7 685 aa12.87□□□□□ -0.35
NEK3-210ENST00000620675 MRM1Q6IN84 353 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms