RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 RCN2Q14257 317 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
MALAT1-215ENST00000619449 TTC19Q6DKK2 380 aaPredicted RBP17.12■□□□□ 0.33
MALAT1-215ENST00000619449 OR4C11Q6IEV9 310 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 NUDCD3Q8IVD9 361 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 ACOT4Q8N9L9 421 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 SELENOMQ8WWX9 145 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 RGMAQ96B86 450 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 PEX11GQ96HA9 241 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 FAR2Q96K12 515 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 MESP1Q9BRJ9 268 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
MALAT1-215ENST00000619449 DDX31Q9H8H2 851 aaKnown RBP17.12■□□□□ 0.33
MALAT1-215ENST00000619449 SEMA3GQ9NS98 782 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 DAPP1Q9UN19 280 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 HS3ST3B1Q9Y662 390 aa17.12■□□□□ 0.33
MALAT1-215ENST00000619449 CDC14CA4D256 554 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 IDSB3KWA1 339 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 KRT6AP02538 564 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 KRT6BP04259 564 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CYC1P08574 325 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 HSD3B1P14060 373 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 HSD3B2P26439 372 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 KRT6CP48668 564 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 LIM2P55344 173 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 RHAGQ02094 409 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 TBL3Q12788 808 aaKnown RBP17.11■□□□□ 0.33
MALAT1-215ENST00000619449 ABRAXAS2Q15018 415 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
MALAT1-215ENST00000619449 TMEM205Q6UW68 189 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 MRGPREQ86SM8 312 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CUZD1Q86UP6 607 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 ZCCHC7Q8N3Z6 543 aaKnown RBP17.11■□□□□ 0.33
MALAT1-215ENST00000619449 THAP4Q8WY91 577 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 TTC9Q92623 222 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 TBC1D20Q96BZ9 403 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 C11orf24Q96F05 449 aaPredicted RBP17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CATSPER2Q96P56 530 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 HBEGFQ99075 208 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CRB3Q9BUF7 120 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 ROGDIQ9GZN7 287 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 VN1R1Q9GZP7 353 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CLDN16Q9Y5I7 305 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 CACNA1BQ00975 2339 aa17.11■□□□□ 0.33
MALAT1-215ENST00000619449 A0A088AWK7 358 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 A0A0A6YYD5 115 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 OR2W5A6NFC9 320 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 CYR61O00622 381 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 B3GALT2O43825 422 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 ULK1O75385 1050 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 EEDO75530 441 aaKnown RBP17.1■□□□□ 0.33
MALAT1-215ENST00000619449 IGHEP01854 428 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 ITGB2P05107 769 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 FHP07954 510 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 UROSP10746 265 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 RNH1P13489 461 aaKnown RBP17.1■□□□□ 0.33
MALAT1-215ENST00000619449 CHN1P15882 459 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 ZNF10P21506 573 aaPredicted RBP17.1■□□□□ 0.33
MALAT1-215ENST00000619449 HMOX2P30519 316 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 RAB38P57729 211 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 CSTF3Q12996 717 aaKnown RBP17.1■□□□□ 0.33
MALAT1-215ENST00000619449 UGT3A2Q3SY77 523 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 TUBB8Q3ZCM7 444 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 KIRREL2Q6UWL6 708 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 TRIM46Q7Z4K8 759 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 PRSS58Q8IYP2 241 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 METTL4Q8N3J2 472 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 PLPP5Q8NEB5 264 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 YIPF2Q9BWQ6 316 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 ACPTQ9BZG2 426 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 SHCBP1LQ9BZQ2 653 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 C20orf27Q9GZN8 174 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 LYRM4Q9HD34 91 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 POLHQ9Y253 713 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 CCL27Q9Y4X3 112 aa17.1■□□□□ 0.33
MALAT1-215ENST00000619449 CACNA1GO43497 2377 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 LOC102723996A0A087X1L8 192 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 WDR91A4D1P6 747 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 FAM227AF5H4B4 570 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 SERPINE1P05121 402 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 SERPINB3P29508 390 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 SSR2P43308 183 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 EMP2P54851 167 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 CHI3L2Q15782 390 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 TBR1Q16650 682 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 LINC00303Q3SY05 128 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 KANK2Q63ZY3 851 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 CLEC6AQ6EIG7 209 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 GBP7Q8N8V2 638 aaPredicted RBP17.09■□□□□ 0.33
MALAT1-215ENST00000619449 ANKRD42Q8N9B4 389 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 TMEM52Q8NDY8 209 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 IP6K3Q96PC2 410 aa17.09■□□□□ 0.33
MALAT1-215ENST00000619449 MAPKAP1Q9BPZ7 522 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms