RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 PKP2Q99959 881 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 NANOGQ9H9S0 305 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 FANCFQ9NPI8 374 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 EIF1AYO14602 144 aaKnown RBP17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 VILLO15195 856 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 SCO2O43819 266 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 JUPP14923 745 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 C1orf94Q6P1W5 598 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 RANBP10Q6VN20 620 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 OR2L3Q8NG85 312 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 OR52B6Q8NGF0 335 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 FGF13Q92913 245 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 TM9SF2Q99805 663 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 GDE1Q9NZC3 331 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
AC008878.3-201ENST00000617428 A0A1W2PRQ8 180 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 DPPA5A6NC42 116 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 KLHL33A6NCF5 533 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 FABP12A6NFH5 140 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 VSTM5A8MXK1 200 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 H3BSH0 61 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 SDHDO14521 159 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 TP53I11O14683 189 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 SMAD6O43541 496 aaKnown RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 IL33O95760 270 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 CEBPBP17676 345 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 UQCRC2P22695 453 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 EDNRAP25101 427 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 LINGO2Q7L985 606 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 MRPL43Q8N983 215 aaKnown RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 B3GAT2Q9NPZ5 323 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 MLLT1Q03111 559 aaPredicted RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 PCDHGB1Q9Y5G3 927 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 PTGDR2Q9Y5Y4 395 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 CSTAP01040 98 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 FBLP22087 321 aaKnown RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 RAB28P51157 221 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 DMPKQ09013 629 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 RAB43Q86YS6 212 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 PNPLA1Q8N8W4 532 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 DAZLQ92904 295 aaKnown RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 DHRS1Q96LJ7 313 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 MAPKAP1Q9BPZ7 522 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 A0A0U1RQS6 177 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 ZNF879B4DU55 563 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 ITGA10O75578 1167 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 IL1RNP18510 177 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 ACSL1P33121 698 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 KCNC4Q03721 635 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 TRAM2Q15035 370 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 EGFLAMQ63HQ2 1017 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 RAB2BQ8WUD1 216 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 PGAP3Q96FM1 320 aaPredicted RBP17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 GRHPRQ9UBQ7 328 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 MYH11P35749 1972 aa17.81■□□□□ 0.44
AC008878.3-201ENST00000617428 J3QLW9 94 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 ZNF19P17023 458 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 RNF144AP50876 292 aaPredicted RBP17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 ABRAXAS2Q15018 415 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 ODF4Q2M2E3 257 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 TMEM225Q6GV28 225 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 OR4N5Q8IXE1 308 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 PNLDC1Q8NA58 520 aaKnown RBP17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 NUP43Q8NFH3 380 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 C9orf43Q8TAL5 461 aaPredicted RBP17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 SLC46A2Q9BY10 475 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 GRIP1Q9Y3R0 1128 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 SPO11Q9Y5K1 396 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 NFS1Q9Y697 457 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 DFNA5O60443 496 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 NPPAP01160 153 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 CD72P21854 359 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 TPRG1LQ5T0D9 272 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 C1orf189Q5VU69 101 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 NXPE4Q6UWF7 544 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 HMGN2P46Q86SG4 172 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 ZNF101Q8IZC7 436 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 GFM1Q96RP9 751 aaKnown RBP17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 CMKLR1Q99788 373 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 CLSTN3Q9BQT9 956 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 HCN4Q9Y3Q4 1203 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 PCDHB14Q9Y5E9 798 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 SAGE2PA6NJ88 616 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 OR4D2P58180 307 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 GALNT12Q8IXK2 581 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 OR8K5Q8NH50 307 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 C1orf216Q8TAB5 229 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 PNPLA2Q96AD5 504 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 DNAJA3Q96EY1 480 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 TRIB3Q96RU7 358 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 RARRES3Q9UL19 164 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 HCFC2Q9Y5Z7 792 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 MAU2Q9Y6X3 613 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 CITO14578 2027 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 A0A1B0GVT2 93 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 TBX1O43435 398 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 HNRNPA2B1P22626 353 aaKnown RBP17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 SLC3A1Q07837 685 aa17.8■□□□□ 0.44
AC008878.3-201ENST00000617428 MPP2Q14168 576 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms