RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 HSDL2Q6YN16 418 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 CHCHD4Q8N4Q1 142 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 PTGR2Q8N8N7 351 aaPredicted RBP11.12□□□□□ -0.63
TP53-222ENST00000617185 CREB3L4Q8TEY5 395 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 USP7Q93009 1102 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 UCN3Q969E3 161 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 SMARCD1Q96GM5 515 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 COQ10AQ96MF6 247 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 SLC2A13Q96QE2 648 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
TP53-222ENST00000617185 PRAMEF33A0A0G2JMD5 474 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 LOC102723532A0A0G2JNH3 316 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 M0R233 179 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
TP53-222ENST00000617185 PRAMEF10O60809 474 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 VIPP01282 170 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 IGHA2P01877 340 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 NUDT6P53370 316 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ZNF124Q15973 351 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SLC39A12Q504Y0 691 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ZNF605Q86T29 641 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ISCA2Q86U28 154 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
TP53-222ENST00000617185 JAZF1Q86VZ6 243 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 OR2T4Q8NH00 348 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SPATA22Q8NHS9 363 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ZFPM2Q8WW38 1151 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 HGDQ93099 445 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 NT5C3BQ969T7 300 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SORBS1Q9BX66 1292 aaKnown RBP11.11□□□□□ -0.63
TP53-222ENST00000617185 ATXN3LQ9H3M9 355 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 MPP6Q9NZW5 540 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 VAPAQ9P0L0 249 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 HCN3Q9P1Z3 774 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 NDRG3Q9UGV2 375 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 STUB1Q9UNE7 303 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 DCLK1O15075 740 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SIX3O95343 332 aaPredicted RBP11.11□□□□□ -0.63
TP53-222ENST00000617185 PRAMEF1O95521 474 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 JCHAINP01591 159 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 CYP17A1P05093 508 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ODC1P11926 461 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 JUPP14923 745 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 ZNF3P17036 446 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 HLA-FP30511 346 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 INPP1P49441 399 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SLC14A2Q15849 920 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 NHLRC3Q5JS37 347 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 RGS7BPQ6MZT1 257 aaPredicted RBP11.11□□□□□ -0.63
TP53-222ENST00000617185 TRIM69Q86WT6 500 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 OR4F6Q8NGB9 312 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 KCTD13Q8WZ19 329 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SLC25A46Q96AG3 418 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 SPATA2Q9UM82 520 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 NEUROG3Q9Y4Z2 214 aa11.11□□□□□ -0.63
TP53-222ENST00000617185 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 MPTX1A8MV57 137 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 MT-CYBP00156 380 aaPredicted RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 PSMA1P25786 263 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 GGT2P36268 569 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 TGM4P49221 684 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 CLCN5P51795 746 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 SREBF2Q12772 1141 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 GTDC1Q4AE62 458 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 ESRP1Q6NXG1 681 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 GCNT7Q6ZNI0 430 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 KIAA0907Q7Z7F0 614 aaPredicted RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 STPG2Q8N412 459 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 WDR36Q8NI36 951 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 EXT2Q93063 718 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 ZNF419Q96HQ0 510 aaPredicted RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 CDCA4Q9BXL8 241 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 FBXW11Q9UKB1 542 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 GLYATL1P3A0A0U1RQE8 302 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 TBX18O95935 607 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 PAMP19021 973 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 NFKB1P19838 968 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 APEX1P27695 318 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 GSTM5P46439 218 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 FGL1Q08830 312 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 GPR17Q13304 367 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 PAFAH1B3Q15102 231 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 PFKFB4Q16877 469 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 XKR7Q5GH72 579 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
TP53-222ENST00000617185 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 FAHD1Q6P587 224 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 TMEM145Q8NBT3 493 aa11.1□□□□□ -0.63
TP53-222ENST00000617185 OR11H7Q8NGC8 314 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms