RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 MSRB3Q8IXL7 192 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CYP4Z2PQ8N1L4 340 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CAMKK1Q8N5S9 505 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 HHIPL1Q96JK4 782 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM129BQ96TA1 746 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAPKAP1Q9BPZ7 522 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PCBD2Q9H0N5 130 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 SSR3Q9UNL2 185 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAN2B2Q9Y2E5 1009 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ADAMTSL1Q8N6G6 1762 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 HIVEP2P31629 2446 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 ASNA1O43681 348 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 KAT7O95251 611 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 VIPP01282 170 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 EPCAMP16422 314 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TPP2P29144 1249 aaPredicted RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 NRIP1P48552 1158 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CSRP3P50461 194 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 WDR5P61964 334 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PRR5P85299 388 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CLCA4Q14CN2 919 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 RGNQ15493 299 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PDZK1Q5T2W1 519 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CBLL1Q75N03 491 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CEP68Q76N32 757 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 C6orf120Q7Z4R8 191 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM124AQ86V42 546 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 CPA6Q8N4T0 437 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR52N2Q8NGI0 321 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 YIPF4Q9BSR8 244 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 RBM38Q9H0Z9 239 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAGIXQ9H6Y5 334 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 PALMDQ9NP74 551 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 TOR4AQ9NXH8 423 aa5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 POLR2AP24928 1970 aaKnown RBP5.41□□□□□ -1.54
SYNCRIP-204ENST00000616122 HIDE1A8MVS5 230 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TAPBPO15533 448 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SERPINI2O75830 405 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPLP0P05388 317 aaKnown RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TCF3P15923 654 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 EPHA2P29317 976 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 RAB28P51157 221 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 CXCR4P61073 352 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 MADCAM1Q13477 382 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 GNA13Q14344 377 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAD2L1BPQ15013 274 aaPredicted RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 COLEC12Q5KU26 742 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLCO4C1Q6ZQN7 724 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC15A4Q8N697 577 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 NATD1Q8N6N6 113 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 AQP11Q8NBQ7 271 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 PAPD5Q8NDF8 572 aaKnown RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 DENND6BQ8NEG7 585 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 CARS2Q9HA77 564 aaKnown RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 NTN4Q9HB63 628 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 ABCG2Q9UNQ0 655 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPL36Q9Y3U8 105 aaKnown RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 HSPE1-MOB4S4R3N1 261 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 BOLA2-SMG1P6H3BVE0 249 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 MAGEB3O15480 346 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 STX11O75558 287 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 KCNK5O95279 499 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 STATHP02808 62 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 CDKN2CP42773 168 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TSC22D1Q15714 1073 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 UNC5DQ6UXZ4 953 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TMEM203Q969S6 136 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALG14Q96F25 216 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC35G5Q96KT7 338 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRMT61BQ9BVS5 477 aaKnown RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 MMP27Q9H306 513 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SNTG1Q9NSN8 517 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 PAK1IP1Q9NWT1 392 aaPredicted RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 NCOR2Q9Y618 2525 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC16A6O15403 523 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 MPZL2O60487 215 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 OLFM2O95897 454 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC35G6P0C7Q6 338 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 HPGDP15428 266 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 TIMP2P16035 220 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC15A1P46059 708 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCR8P51685 355 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 GRSF1Q12849 480 aaKnown RBP eCLIP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 LRRC32Q14392 662 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 FBXO43Q4G163 708 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 LRIF1Q5T3J3 769 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR10G6Q8NH81 332 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 UBE2FQ969M7 185 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SPIN1Q9Y657 262 aaPredicted RBP5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 SHANK1Q9Y566 2161 aa5.4□□□□□ -1.54
SYNCRIP-204ENST00000616122 GREB1LQ9C091 1923 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CAPN5O15484 640 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 HNRNPA1P09651 372 aaKnown RBP eCLIP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 OPRL1P41146 370 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC6A12P48065 614 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 VEGFBP49765 207 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CRISP1P54107 249 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms