RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDC123O75794 336 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 BCAS2O75934 225 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OPN1SWP03999 348 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 SYT16Q17RD7 645 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 RSBN1Q5VWQ0 802 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CNTN4Q8IWV2 1026 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR10G2Q8NGC3 310 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR13J1Q8NGT2 312 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 SNX33Q8WV41 574 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 C1orf21Q9H246 121 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 AIG1Q9NVV5 245 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 ANKMY1Q9P2S6 941 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 DKKL1Q9UK85 242 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 LIPT1Q9Y234 373 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 C17orf113A0A1B0GUU1 675 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 HYKKA2RU49 373 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 HCN1O60741 890 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 F3P13726 295 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PORP16435 677 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 FADDQ13158 208 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 TYSND1Q2T9J0 566 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM214Q6NUQ4 689 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR52B6Q8NGF0 335 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 MYADMQ96S97 322 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 BHLHE41Q9C0J9 482 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PCDHAC1Q9H158 963 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 POT1Q9NUX5 634 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 A0A1B0GTW7 788 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 TRAPPC6AO75865 159 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 SRFP11831 508 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 POU2F1P14859 743 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 GLULP15104 373 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 DNAJA1P31689 397 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PCDH1Q08174 1060 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 GANABQ14697 944 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM52BQ4KMG9 183 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 KANK2Q63ZY3 851 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 UBALD2Q8IYN6 164 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 SYNPOQ8N3V7 929 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 NUP43Q8NFH3 380 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.06□□□□□ -0.962e-7■■■■■ 39
CLTCL1-208ENST00000615606 LDAHQ9H6V9 325 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 ACTR3BQ9P1U1 418 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CPNE7Q9UBL6 633 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CKLFQ9UBR5 152 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 SRPK3Q9UPE1 567 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 E7ENX8 843 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 RGS10O43665 173 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 DFNA5O60443 496 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PRKD3O94806 890 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 AHSA1O95433 338 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 AK1P00568 194 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 AK4P27144 223 aaPredicted RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 MMP12P39900 470 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 DCDC1P59894 354 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 TXNL4AP83876 142 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 FCHO2Q0JRZ9 810 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 MAPK11Q15759 364 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 CRB2Q5IJ48 1285 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 IKBIPQ70UQ0 350 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF550Q7Z398 422 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 PGBD5Q8N414 524 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR52E1Q8NGJ3 308 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR5M3Q8NGP4 307 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 OR8K5Q8NH50 307 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 LGR4Q9BXB1 951 aa9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 ZFR2Q9UPR6 939 aaKnown RBP9.06□□□□□ -0.96
CLTCL1-208ENST00000615606 A6NCN8 305 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 TOR1BO14657 336 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 CREG1O75629 220 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 RCBTB2O95199 551 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 LDOC1O95751 146 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ANGPTL1O95841 491 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 AFF3P51826 1226 aaKnown RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PGGT1BP53609 377 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 RBBP4Q09028 425 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PTGR1Q14914 329 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SMU1Q2TAY7 513 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ADAMTSL4Q6UY14 1074 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 LGI4Q8N135 537 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 OR8J3Q8NGG0 315 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC22A8Q8TCC7 542 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM234Q8WY98 164 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 KAT2AQ92830 837 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 EFHD2Q96C19 240 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC39A3Q9BRY0 314 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 C11orf16Q9NQ32 467 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 GIN1Q9NXP7 522 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 MCM8Q9UJA3 840 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 FANCGO15287 622 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 IL1RNP18510 177 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 AOAHP28039 575 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 CLDN8P56748 225 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 HTRA4P83105 476 aaPredicted RBP9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 ADGRE1Q14246 886 aa9.05□□□□□ -0.96
CLTCL1-208ENST00000615606 PPP1R3AQ16821 1122 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms