RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SPINK14Q6IE38 97 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 TCTN3Q6NUS6 607 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 WDR20Q8TBZ3 569 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 ANKRD7Q92527 254 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 SNRNP40Q96DI7 357 aaKnown RBP5.35□□□□□ -1.55
CPNE3-208ENST00000614678 IMMP1LQ96LU5 166 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 MS4A8Q9BY19 250 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 ACTR8Q9H981 624 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 FIS1Q9Y3D6 152 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 IKBKGQ9Y6K9 419 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 TEX15Q9BXT5 2789 aa5.35□□□□□ -1.55
CPNE3-208ENST00000614678 NCKAP5O14513 1909 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TTLL8A6PVC2 850 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 MKRN2OSH3BPM6 223 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 FGF17O60258 216 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SUPT7LO94864 414 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 WDPCPO95876 746 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PDYNP01213 254 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CHRNGP07510 517 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 FHP07954 510 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 EPB42P16452 691 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CCND1P24385 295 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SOX18P35713 384 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ALDH18A1P54886 795 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PRMT9Q6P2P2 845 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM64Q6YI46 380 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TRMT10CQ7L0Y3 403 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ACOT4Q8N9L9 421 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TEX19Q8NA77 164 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CLEC1AQ8NC01 280 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 RHEBL1Q8TAI7 183 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 NT5CQ8TCD5 201 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PTCD3Q96EY7 689 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TAAR6Q96RI8 345 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 DPH2Q9BQC3 489 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PCBD2Q9H0N5 130 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 WDR54Q9H977 334 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PELI2Q9HAT8 420 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PNO1Q9NRX1 252 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ABCA12Q86UK0 2595 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 NSG1A0A0A6YYJ2 146 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ANKDD1BA6NHY2 528 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 C17orf51A8MQB3 221 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TCP11X1B4DZS4 312 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 G3V3Y1 287 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 MYO1DO94832 1006 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ALBP02768 609 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 RPS17P08708 135 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 AVPR1BP47901 424 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 MYBPC3Q14896 1274 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ADPRMQ3LIE5 342 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF678Q5SXM1 525 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM205Q6UW68 189 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF227Q86WZ6 799 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CCNYL1Q8N7R7 359 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 FKBP10Q96AY3 582 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TBC1D20Q96BZ9 403 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CATSPER2Q96P56 530 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 FAM117AQ9C073 453 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PSMC3IPQ9P2W1 217 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ZNF180Q9UJW8 692 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PADI2Q9Y2J8 665 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SLC22A7Q9Y694 548 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM200CA6NKL6 621 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SEMA7AO75326 666 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 KRT38O76015 456 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SERPINA6P08185 405 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ABHD2P08910 425 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 KRT15P19012 456 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 GNLYP22749 145 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ATP5A1P25705 553 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 AHRP35869 848 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 NAGLUP54802 743 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 MC1RQ01726 317 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PCBP2Q15366 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TUBB8Q3ZCM7 444 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CRTC2Q53ET0 693 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 PAPD4Q6PIY7 484 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 CPEB2Q7Z5Q1 589 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 C10orf107Q8IVU9 208 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 TMEM102Q8N9M5 508 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 ARMC2Q8NEN0 867 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 SMAD5Q99717 465 aaKnown RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 EFHD1Q9BUP0 239 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 EBPLQ9BY08 206 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 C20orf27Q9GZN8 174 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 GSTO2Q9H4Y5 243 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 MKKSQ9NPJ1 570 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-208ENST00000614678 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 KLHL1Q9NR64 748 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 GRID1Q9ULK0 1009 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 DAPP1Q9UN19 280 aa5.34□□□□□ -1.55
CPNE3-208ENST00000614678 POLQO75417 2590 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 GTF3C1Q12789 2109 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 A0A1W2PR48 441 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 WDR91A4D1P6 747 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 H0YIG0 161 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 PEX12O00623 359 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms