RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LACC1Q8IV20 430 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SIDT2Q8NBJ9 832 aaKnown RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 MUL1Q969V5 352 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 CDK15Q96Q40 435 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SIX2Q9NPC8 291 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 ERVW-1Q9UQF0 538 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 PCDHB9Q9Y5E1 797 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 TJP1Q07157 1748 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 TRBC2A0A5B9 178 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 MEIS2O14770 477 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SCGB1D1O95968 90 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 RAB8AP61006 207 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 RAP2BP61225 183 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SGCGQ13326 291 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 CMASQ8NFW8 434 aaPredicted RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 LRRC46Q96FV0 321 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 PPP1R16AQ96I34 528 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 OR2S2Q9NQN1 319 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 ZNF823P16415 610 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 BMP8BP34820 402 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 CXCR4P61073 352 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 CLPPQ16740 277 aaPredicted RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 PPP1R3AQ16821 1122 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 BMP8AQ7Z5Y6 402 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 TIFAQ96CG3 184 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 RIPOR3Q96MK2 946 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 OR14A2Q96R54 314 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 NIPAL2Q9H841 368 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 VPS29Q9UBQ0 182 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 SDC3O75056 442 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 ECI2O75521 394 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 RAB4AP20338 218 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
CHD1-212ENST00000614616 ADAD1Q96M93 576 aaKnown RBP13.3□□□□□ -0.28
CHD1-212ENST00000614616 MAGEA3P43357 314 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 SUMF2Q8NBJ7 301 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 A0A096LPI6 279 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 BHLHE40O14503 412 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 MAOBP27338 520 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 DDOSTP39656 456 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 KCNC4Q03721 635 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ENTHD1Q8IYW4 607 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 COQ8BQ96D53 544 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 DTLQ9NZJ0 730 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 COPS3Q9UNS2 423 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 TLL1O43897 1013 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 NTSR2O95665 410 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 MAGEB1P43366 347 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 BRCC3P46736 316 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 GTF2IRD2BQ6EKJ0 949 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 GTF2IRD2Q86UP8 949 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 PROKR2Q8NFJ6 384 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 SMCO4Q9NRQ5 59 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 GPR83Q9NYM4 423 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 RIMS3Q9UJD0 308 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 NFASCO94856 1347 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 CDC7O00311 574 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 MBP02144 154 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 G6PDP11413 515 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 RHCEP18577 417 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 DDCP20711 480 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 CBX2Q14781 532 aaPredicted RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 SPCS2Q15005 226 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 METAP1DQ6UB28 335 aaPredicted RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 RFPL4BQ6ZWI9 263 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 THAP7Q9BT49 309 aaPredicted RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 RHBGQ9H310 441 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 AP1G1O43747 822 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 GALK2Q01415 458 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 TLE3Q04726 772 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ST3GAL3Q11203 375 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 METTL2BQ6P1Q9 378 aaKnown RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 ZNF101Q8IZC7 436 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■■■■ 28
CHD1-212ENST00000614616 PYCR2Q96C36 320 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 METTL2AQ96IZ6 378 aaKnown RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 LAMP5Q9UJQ1 280 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 A0A0D9SG52 128 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
CHD1-212ENST00000614616 TNFSF9P41273 254 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 COTL1Q14019 142 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 CEACAM20Q6UY09 585 aa13.29□□□□□ -0.28
CHD1-212ENST00000614616 TRIM46Q7Z4K8 759 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms