RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SDE2Q6IQ49 451 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 NIPAL1Q6NVV3 410 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 MED27Q6P2C8 311 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.08□□□□□ -0.16
CDH1-213ENST00000612417 SLCO6A1Q86UG4 719 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 APH1BQ8WW43 257 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 RAB7BQ96AH8 199 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 FOPNLQ96NB1 174 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 PRO3102Q9H379 93 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 AASSQ9UDR5 926 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 EXO1Q9UQ84 846 aaKnown RBP14.08□□□□□ -0.16
CDH1-213ENST00000612417 FOXE1O00358 373 aaPredicted RBP14.07□□□□□ -0.16
CDH1-213ENST00000612417 ADAMDEC1O15204 470 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 PCDH7O60245 1069 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 PCDH8O95206 1070 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 CTHP32929 405 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 GRK3P35626 688 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 MVDP53602 400 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 SELENOWP63302 87 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 ZNF763Q0D2J5 394 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 TMEM115Q12893 351 aaPredicted RBP14.07□□□□□ -0.16
CDH1-213ENST00000612417 FADDQ13158 208 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 DGUOKQ16854 277 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 UBE2UQ5VVX9 321 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
CDH1-213ENST00000612417 ENTHD1Q8IYW4 607 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
CDH1-213ENST00000612417 TMCO5AQ8N6Q1 288 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 DYNC2LI1Q8TCX1 351 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 GANCQ8TET4 914 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 FOXJ1Q92949 421 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 NEIL2Q969S2 332 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 RHNO1Q9BSD3 238 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 RSPH9Q9H1X1 276 aaPredicted RBP14.07□□□□□ -0.16
CDH1-213ENST00000612417 PCDHGA6Q9Y5G7 932 aa14.07□□□□□ -0.16
CDH1-213ENST00000612417 OR2A25A4D2G3 310 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 C2CD4DB7Z1M9 353 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 K7ESM1 405 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 M0R3G1 203 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 MAN1A2O60476 641 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 FADS2O95864 444 aaKnown RBP14.06□□□□□ -0.16
CDH1-213ENST00000612417 FUCA1P04066 466 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PTX3P26022 381 aaPredicted RBP14.06□□□□□ -0.16
CDH1-213ENST00000612417 RRM2P31350 389 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 KIR2DL1P43626 348 aaPredicted RBP14.06□□□□□ -0.16
CDH1-213ENST00000612417 SERPINB10P48595 397 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 BCAP31P51572 246 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 RPS13P62277 151 aaKnown RBP14.06□□□□□ -0.16
CDH1-213ENST00000612417 RBBP4Q09028 425 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ITGADQ13349 1161 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PDE7AQ13946 482 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 COL19A1Q14993 1142 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDH1-213ENST00000612417 PIP5KL1Q5T9C9 394 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 MLIPQ5VWP3 458 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 NLRP8Q86W28 1048 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 NAGSQ8N159 534 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 HDDC3Q8N4P3 179 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 OR4A15Q8NGL6 344 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 NDNFQ8TB73 568 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PHF10Q8WUB8 498 aaKnown RBP14.06□□□□□ -0.16
CDH1-213ENST00000612417 FCGR1BQ92637 280 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 MAL2Q969L2 176 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 MYOCQ99972 504 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 REEP4Q9H6H4 257 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PLCXD1Q9NUJ7 323 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 GPATCH2Q9NW75 528 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 NDUFAF4Q9P032 175 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 SH3GLB1Q9Y371 365 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 LYVE1Q9Y5Y7 322 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 DOCK9Q9BZ29 2069 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 GNG14A0A1W2PPG7 69 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 TNFRSF21O75509 655 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 C1orf105O95561 183 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ADH1BP00325 375 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 EGFP01133 1207 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PSMB9P28065 219 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PSMD7P51665 324 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ATP1A4Q13733 1029 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ENPP2Q13822 863 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 STARD3Q14849 445 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ZNF385BQ569K4 471 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 TMEM220Q6QAJ8 160 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 LAS2Q8IYD9 372 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ZNF480Q8WV37 535 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 EFCAB11Q9BUY7 163 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 MROQ9BYG7 248 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 EHD1Q9H4M9 534 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 EPS8L2Q9H6S3 715 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 ATAD3AQ9NVI7 634 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 SH3BP4Q9P0V3 963 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 GULP1Q9UBP9 304 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 PIAS3Q9Y6X2 628 aa14.06□□□□□ -0.16
CDH1-213ENST00000612417 NUMA1Q14980 2115 aa14.05□□□□□ -0.16
CDH1-213ENST00000612417 A0A1W2PP55 124 aa14.05□□□□□ -0.16
CDH1-213ENST00000612417 A8MVJ9 347 aa14.05□□□□□ -0.16
CDH1-213ENST00000612417 KPNA4O00629 521 aaPredicted RBP14.05□□□□□ -0.16
CDH1-213ENST00000612417 PORP16435 677 aaPredicted RBP14.05□□□□□ -0.16
CDH1-213ENST00000612417 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms