RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 SH3BP4Q9P0V3 963 aa10.59□□□□□ -0.71
CDH4-202ENST00000611855 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 RFXAPO00287 272 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 PSMA1P25786 263 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 RHOAP61586 193 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ARF5P84085 180 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ZNF177Q13360 481 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 MAB21L1Q13394 359 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 BOP1Q14137 746 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 FGFBP1Q14512 234 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 IQCCQ4KMZ1 466 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 COX20Q5RI15 118 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 LCN1P1Q5VSP4 162 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ANKRD54Q6NXT1 300 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 PTCHD4Q6ZW05 846 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 CREB3L2Q70SY1 520 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 SERPINA11Q86U17 422 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 RNF130Q86XS8 419 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 BBS7Q8IWZ6 715 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 RDH10Q8IZV5 341 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 OR5AK3PQ8NH89 298 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 MAGEH1Q9H213 219 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 NDUFAF4Q9P032 175 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 TRPS1Q9UHF7 1281 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 PCDHGB3Q9Y5G1 929 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 KCNE2Q9Y6J6 123 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 FABP7O15540 132 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ACSL4O60488 711 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 F11P03951 625 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ANXA5P08758 320 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ICAM2P13598 275 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ETFAP13804 333 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 SSTR2P30874 369 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 WNT3P56703 355 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 TSTA3Q13630 321 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 HKDC1Q2TB90 917 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 C22orf42Q6IC83 251 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 TSPAN33Q86UF1 283 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 COMMD7Q86VX2 200 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 CARNMT1Q8N4J0 409 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 LMNTD1Q8N9Z9 388 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH4-202ENST00000611855 SIPA1Q96FS4 1042 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 FAM129BQ96TA1 746 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 NTMT1Q9BV86 223 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 POLR2J2Q9GZM3 115 aaKnown RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 C3orf14Q9HBI5 128 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 IL26Q9NPH9 171 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 MYO10Q9HD67 2058 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 A0A075B6Q4 140 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 FADS2P1A8MWK0 482 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 KDELR3O43731 214 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 SLC22A5O76082 557 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 KLKB1P03952 638 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 SEMG1P04279 462 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 SLC2A2P11168 524 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 NAGAP17050 411 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 IL32P24001 234 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 CSTF2P33240 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH4-202ENST00000611855 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 ASAH1Q13510 395 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 DGKKQ5KSL6 1271 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 UBE2R2Q712K3 238 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 ZNF367Q7RTV3 350 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 WDR53Q7Z5U6 358 aaPredicted RBP10.58□□□□□ -0.72
CDH4-202ENST00000611855 ATCAYQ86WG3 371 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 TCTE3Q8IZS6 198 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 STK40Q8N2I9 435 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 REPS1Q96D71 796 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 QRFPRQ96P65 431 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
CDH4-202ENST00000611855 PRAMEF25A6NGN4 478 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 GAPDHSO14556 408 aaPredicted RBP10.57□□□□□ -0.72
CDH4-202ENST00000611855 MYL12BO14950 172 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 LZTS3O60299 673 aaPredicted RBP10.57□□□□□ -0.72
CDH4-202ENST00000611855 TRBC1P01850 177 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 ALPPP05187 535 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 IL1RNP18510 177 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 MYL12AP19105 171 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 CHIT1Q13231 466 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 NFATC2Q13469 925 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 LARS2Q15031 903 aaKnown RBP10.57□□□□□ -0.72
CDH4-202ENST00000611855 SNAPC1Q16533 368 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 TTLL9Q3SXZ7 439 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 FAM122CQ6P4D5 195 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 ANKS3Q6ZW76 656 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 VRK3Q8IV63 474 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 RBFAQ8N0V3 343 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 ZNF431Q8TF32 576 aaPredicted RBP10.57□□□□□ -0.72
CDH4-202ENST00000611855 CRELD1Q96HD1 420 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 WACQ9BTA9 647 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 GABARAPL3Q9BY60 117 aa10.57□□□□□ -0.72
CDH4-202ENST00000611855 GCM2O75603 506 aaPredicted RBP10.57□□□□□ -0.72
CDH4-202ENST00000611855 CD160O95971 181 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms