RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FOXD4Q12950 439 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 ZNF630Q2M218 657 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 RTL10Q7L3V2 364 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 SPRED2Q7Z698 418 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 LRRC56Q8IYG6 542 aaPredicted RBP16.48■□□□□ 0.23
NEK3-206ENST00000611833 RHOXF1Q8NHV9 184 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 UBE2E3Q969T4 207 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 RSPRY1Q96DX4 576 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 THSD1Q9NS62 852 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 PLCXD1Q9NUJ7 323 aa16.48■□□□□ 0.23
NEK3-206ENST00000611833 TMEM247A6NEH6 219 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 CLCA1A8K7I4 914 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 J3KTA2 159 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 KLHL18O94889 574 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 IL3P08700 152 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 BMP4P12644 408 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 PIK3CBP42338 1070 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 NFE2L1Q14494 772 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 CCDC80Q76M96 950 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 SNX29P2Q8IUI4 249 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 DEPDC4Q8N2C3 294 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 DNAJC22Q8N4W6 341 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 C2orf73Q8N5S3 287 aaPredicted RBP16.47■□□□□ 0.23
NEK3-206ENST00000611833 WFIKKN2Q8TEU8 576 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 GEMIN6Q8WXD5 167 aaKnown RBP16.47■□□□□ 0.23
NEK3-206ENST00000611833 GGHQ92820 318 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 MTERF3Q96E29 417 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 MROQ9BYG7 248 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 TRNAU1APQ9NX07 287 aaKnown RBP16.47■□□□□ 0.23
NEK3-206ENST00000611833 RAB23Q9ULC3 237 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 ANGPT4Q9Y264 503 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 PCDHGA2Q9Y5H1 932 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 PRAMEF25A6NGN4 478 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 PI15O43692 258 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 AIREO43918 545 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 MMP20O60882 483 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 C6P13671 934 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 POU2F1P14859 743 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 LIPAP38571 399 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 SLC19A1P41440 591 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 PXNP49023 591 aaPredicted RBP16.47■□□□□ 0.23
NEK3-206ENST00000611833 NUDT6P53370 316 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 OXA1LQ15070 435 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 TIGD6Q17RP2 521 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 CRB2Q5IJ48 1285 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 TMIGD1Q6UXZ0 262 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 CCDC103Q8IW40 242 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 MFSD4AQ8N468 514 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 OR9Q2Q8NGE9 314 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 IL17FQ96PD4 163 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 SORBS1Q9BX66 1292 aaKnown RBP16.47■□□□□ 0.23
NEK3-206ENST00000611833 IMPAD1Q9NX62 359 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 SLC27A6Q9Y2P4 619 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 SNX8Q9Y5X2 465 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 C5orf42Q9H799 3197 aa16.47■□□□□ 0.23
NEK3-206ENST00000611833 HOXC11O43248 304 aaPredicted RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 PAPLNO95428 1278 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 CDK1P06493 297 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 ITGB7P26010 798 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 EEF1A2Q05639 463 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 CAMK1Q14012 370 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 PRSS53Q2L4Q9 553 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 PRAMEF14Q5SWL7 426 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 C9orf64Q5T6V5 341 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 PRAMEF13Q5VWM6 474 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 MLIPQ5VWP3 458 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 STX19Q8N4C7 294 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 ZNF514Q96K75 400 aaPredicted RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 SLC6A16Q9GZN6 736 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 SLIRPQ9GZT3 109 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 DCSTAMPQ9H295 470 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 PLAGL1Q9UM63 463 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 MRPS23Q9Y3D9 190 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 PCYT1BQ9Y5K3 369 aaPredicted RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 PRAMEF10O60809 474 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
NEK3-206ENST00000611833 VIPR2P41587 438 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 SLC6A11P48066 632 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 GANABQ14697 944 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 TBCEQ15813 527 aaPredicted RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 FNDC3BQ53EP0 1204 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 FAM180BQ6P0A1 224 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 ARMC8Q8IUR7 673 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 ETFBKMTQ8IXQ9 262 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 MMP21Q8N119 569 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 CELF5Q8N6W0 485 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 MCFD2Q8NI22 146 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 SETD7Q8WTS6 366 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 GTPBP3Q969Y2 492 aaKnown RBP16.46■□□□□ 0.23
NEK3-206ENST00000611833 ZFYVE19Q96K21 471 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 ACAT2Q9BWD1 397 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 NLNQ9BYT8 704 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 GPR83Q9NYM4 423 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 OSGIN1Q9UJX0 560 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 DUSP12Q9UNI6 340 aa16.46■□□□□ 0.23
NEK3-206ENST00000611833 C17orf113A0A1B0GUU1 675 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms