RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SH2B3Q9UQQ2 575 aa20.53■□□□□ 0.88
CBWD3-207ENST00000611426 OSGIN2Q9Y236 505 aa20.53■□□□□ 0.88
CBWD3-207ENST00000611426 SCN3AQ9NY46 2000 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 TRAV17A0A0B4J275 112 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 PABPN1LA6NDY0 278 aaKnown RBP20.52■□□□□ 0.88
CBWD3-207ENST00000611426 TMEM114B3SHH9 223 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 E2F3O00716 465 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ITGAMP11215 1152 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 NEFHP12036 1026 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 CD1DP15813 335 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 IL1RNP18510 177 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 DNAJB13P59910 316 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 IL2P60568 153 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ASPHQ12797 758 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 STX3Q13277 289 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 PHKG1Q16816 387 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 CES4AQ5XG92 561 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 TMEM214Q6NUQ4 689 aaKnown RBP20.52■□□□□ 0.88
CBWD3-207ENST00000611426 LCTLQ6UWM7 567 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 FAM47EQ6ZV65 393 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ASPGQ86U10 573 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ISCA2Q86U28 154 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 BCORP1Q8N888 145 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 CCDC197Q8NCU1 140 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 OR51Q1Q8NH59 317 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 TM4SF19Q96DZ7 209 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 IMMP1LQ96LU5 166 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ELAC2Q9BQ52 826 aaKnown RBP20.52■□□□□ 0.88
CBWD3-207ENST00000611426 SGPP1Q9BX95 441 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 VN1R1Q9GZP7 353 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ANKHQ9HCJ1 492 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 OLAHQ9NV23 265 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 HCN3Q9P1Z3 774 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 KLHL14Q9P2G3 628 aa20.52■□□□□ 0.88
CBWD3-207ENST00000611426 ZGRF1Q86YA3 2104 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 SGK494L7N484 410 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 LCMT2O60294 686 aaKnown RBP20.51■□□□□ 0.87
CBWD3-207ENST00000611426 SNUPNO95149 360 aaKnown RBP20.51■□□□□ 0.87
CBWD3-207ENST00000611426 TSPAN12O95859 305 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 F10P00742 488 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 CDH1P12830 882 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 NPPBP16860 134 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 ATP5F1P24539 256 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-207ENST00000611426 COL8A1P27658 744 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 BCL6P41182 706 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 LIPMQ5VYY2 423 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 CAPN13Q6MZZ7 669 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-207ENST00000611426 AMER2Q8N7J2 671 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 KCT2Q8NC54 265 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 ZCCHC10Q8TBK6 192 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 SLC13A3Q8WWT9 602 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 KIAA1191Q96A73 305 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 SCYL1Q96KG9 808 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 HAUS8Q9BT25 410 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 ARL15Q9NXU5 204 aa20.51■□□□□ 0.87
CBWD3-207ENST00000611426 C19orf25Q9UFG5 118 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-207ENST00000611426 LRRTM2O43300 516 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 SERPINB5P36952 375 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 XCR1P46094 333 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 ABHD17BQ5VST6 288 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 C6orf89Q6UWU4 347 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 CPEB2Q7Z5Q1 589 aaKnown RBP20.5■□□□□ 0.87
CBWD3-207ENST00000611426 SLX1AQ9BQ83 275 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 TRIM54Q9BYV2 358 aa20.5■□□□□ 0.87
CBWD3-207ENST00000611426 CRYBG3Q68DQ2 2970 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 IGHV3-20A0A0C4DH32 117 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 EBAG9O00559 213 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 DLX3O60479 287 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 SEC24DO94855 1032 aaPredicted RBP20.49■□□□□ 0.87
CBWD3-207ENST00000611426 WDPCPO95876 746 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 CYC1P08574 325 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 SLC35G6P0C7Q6 338 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 TROVE2P10155 538 aaKnown RBP eCLIP20.49■□□□□ 0.87
CBWD3-207ENST00000611426 TFEBP19484 476 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 LANCL3Q6ZV70 420 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 ZNF771Q7L3S4 317 aaPredicted RBP20.49■□□□□ 0.87
CBWD3-207ENST00000611426 SLC22A9Q8IVM8 553 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 SHISA5Q8N114 240 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 MFSD9Q8NBP5 474 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 PYCR2Q96C36 320 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 SIKE1Q9BRV8 207 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 STMN3Q9NZ72 180 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 CPSF2Q9P2I0 782 aaKnown RBP20.49■□□□□ 0.87
CBWD3-207ENST00000611426 TEKT2Q9UIF3 430 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 HAO1Q9UJM8 370 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 ARL2BPQ9Y2Y0 163 aa20.49■□□□□ 0.87
CBWD3-207ENST00000611426 DIDO1Q9BTC0 2240 aaKnown RBP20.49■□□□□ 0.87
CBWD3-207ENST00000611426 CELSR2Q9HCU4 2923 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 OR2W5A6NFC9 320 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 CCR8P51685 355 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 AP1S2P56377 157 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 PER3P56645 1201 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 ZNF33BQ06732 778 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 INAQ16352 499 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 SPATA6LQ8N4H0 392 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 PPP1R14CQ8TAE6 165 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 SUN3Q8TAQ9 357 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 TAAR6Q96RI8 345 aa20.48■□□□□ 0.87
CBWD3-207ENST00000611426 ATOH8Q96SQ7 321 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms