RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF770Q6IQ21 691 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-220ENST00000608988 USP45Q70EL2 814 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 PEX5LQ8IYB4 626 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 TCTE3Q8IZS6 198 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 CACTIN-AS1Q8N1I8 211 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 RNF175Q8N4F7 328 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 NFKBIDQ8NI38 313 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ASIC4Q96FT7 647 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 BBS2Q9BXC9 721 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ARHGAP39Q9C0H5 1083 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 C1GALT1Q9NS00 363 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 KLHL20Q9Y2M5 609 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 ALPK3Q96L96 1907 aa21.42■■□□□ 1.02
SHANK2-220ENST00000608988 NPIPB15A6NHN6 443 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 K7ERQ8 282 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ADAMTS4O75173 837 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ADRA2AP08913 450 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 GSTM1P09488 218 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 PCBP3P57721 371 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ZXDBP98169 803 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 RTP2Q5QGT7 225 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MFSD14CQ5VZR4 134 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ZNF438Q7Z4V0 828 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 LAS2Q8IYD9 372 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ANGPTL6Q8NI99 470 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 TTC9Q92623 222 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 GTPBP3Q969Y2 492 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 SLC25A46Q96AG3 418 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 REPS1Q96D71 796 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 SCRN2Q96FV2 425 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MTERF1Q99551 399 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 SLC35A5Q9BS91 424 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MCOLN1Q9GZU1 580 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ELAC1Q9H777 363 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 SGK2Q9HBY8 427 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ABCB8Q9NUT2 735 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 PAQR5Q9NXK6 330 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 KLHL21Q9UJP4 597 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MGAT4BQ9UQ53 548 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 C2orf78A6NCI8 922 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 CACNB4O00305 520 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 CSO75390 466 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 AP2A2O94973 939 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MYCP01106 439 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ARAFP10398 606 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 OSMP13725 252 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ATP1B2P14415 290 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 TNFRSF1BP20333 461 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ERP29P30040 261 aaKnown RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 OR1E2P47887 323 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ILKQ13418 452 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 SLC35F1Q5T1Q4 408 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 TSPAN33Q86UF1 283 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 LAX1Q8IWV1 398 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 NANOGP1Q8N7R0 232 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 OR6K2Q8NGY2 324 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ELMO1Q92556 727 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 FRMD6Q96NE9 622 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 MED18Q9BUE0 208 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 ATG10Q9H0Y0 220 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 NMNAT1Q9HAN9 279 aaPredicted RBP21.41■■□□□ 1.02
SHANK2-220ENST00000608988 GPATCH2Q9NW75 528 aa21.41■■□□□ 1.02
SHANK2-220ENST00000608988 NDUFB5O43674 189 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 ENTPD6O75354 484 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 IFNW1P05000 195 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 HMGA1P17096 107 aaKnown RBP21.4■■□□□ 1.02
SHANK2-220ENST00000608988 MAPK9P45984 424 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 RACK1P63244 317 aaKnown RBP21.4■■□□□ 1.02
SHANK2-220ENST00000608988 E2F2Q14209 437 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 COX20Q5RI15 118 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 C17orf99Q6UX52 265 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 DDX53Q86TM3 631 aaKnown RBP21.4■■□□□ 1.02
SHANK2-220ENST00000608988 VRK3Q8IV63 474 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 TAGAPQ8N103 731 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 WBP2Q969T9 261 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 DMRTB1Q96MA1 342 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 DIABLOQ9NR28 239 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 SNTG1Q9NSN8 517 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 ACOXLQ9NUZ1 547 aa21.4■■□□□ 1.02
SHANK2-220ENST00000608988 TPST2O60704 377 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 GPR37L1O60883 481 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 PDE9AO76083 593 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 MYL9P24844 172 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 TP53BP2Q13625 1128 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 DDX39BQ13838 428 aaKnown RBP21.39■■□□□ 1.02
SHANK2-220ENST00000608988 PDE7AQ13946 482 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 KCNA10Q16322 511 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 OCLNQ16625 522 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 TRIM60Q495X7 471 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 C12orf73Q69YU5 71 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 MTERF3Q96E29 417 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 TRMT2BQ96GJ1 504 aaKnown RBP21.39■■□□□ 1.02
SHANK2-220ENST00000608988 UCK2Q9BZX2 261 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 RNF121Q9H920 327 aa21.39■■□□□ 1.02
SHANK2-220ENST00000608988 UPK3BL1B0FP48 263 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 B4DXG7 233 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 UPK3BL2E5RIL1 263 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 E7EQ34 232 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 M0R129 80 aa21.39■■□□□ 1.01
SHANK2-220ENST00000608988 SEPT4O43236 478 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms