RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NPLQ9BXD5 320 aaPredicted RBP12.27□□□□□ -0.45
RPS28-204ENST00000602140 MOCS1Q9NZB8 636 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 ZNF223Q9UK11 482 aaPredicted RBP12.27□□□□□ -0.45
RPS28-204ENST00000602140 PKDREJQ9NTG1 2253 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 NCF1BA6NI72 391 aaPredicted RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 NCF1CA8MVU1 366 aaPredicted RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 CLDN4O14493 209 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 B3GALT2O43825 422 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 TPOP07202 933 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 NCF1P14598 390 aaPredicted RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 SSTR2P30874 369 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 GPR143P51810 404 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 HNRNPFP52597 415 aaKnown RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 PLA2G16P53816 162 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 HSD17B7P56937 341 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 RAB38P57729 211 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 SLC13A2Q13183 592 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 TGFBIQ15582 683 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 C16orf47Q6ZP98 133 aaPredicted RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 CD163Q86VB7 1156 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 KRT78Q8N1N4 520 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 FAM47BQ8NA70 645 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 C16orf52Q8NHV5 167 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 FAM57AQ8TBR7 257 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 VPS39Q96JC1 886 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 RUNDC3BQ96NL0 473 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 QRFPRQ96P65 431 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 CCDC77Q9BR77 488 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 TRIM31Q9BZY9 425 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 RHOJQ9H4E5 214 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 COQ3Q9NZJ6 369 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 KCMF1Q9P0J7 381 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 ITGB1BP2Q9UKP3 347 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 PPIEQ9UNP9 301 aaKnown RBP12.26□□□□□ -0.45
RPS28-204ENST00000602140 CLDN16Q9Y5I7 305 aa12.26□□□□□ -0.45
RPS28-204ENST00000602140 A0A088AWK7 358 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ANKDD1BA6NHY2 528 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 TP73O15350 636 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 TAPBPO15533 448 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 PRKNO60260 465 aaPredicted RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 CLEC3AO75596 197 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 PIAS1O75925 651 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ZFAND5O76080 213 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 PDE9AO76083 593 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 TFEBP19484 476 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ZNF10P21506 573 aaPredicted RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 GSTM2P28161 218 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 SSR4P51571 173 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 SLC12A2P55011 1212 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CMPK2Q5EBM0 449 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 TRIM40Q6P9F5 258 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CAPN12Q6ZSI9 719 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 VN1R5Q7Z5H4 357 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CLNKQ7Z7G1 428 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 SPATA6LQ8N4H0 392 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ZFP62Q8NB50 900 aaPredicted RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 OR2L5Q8NG80 312 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 SPOCK3Q9BQ16 436 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CAPS2Q9BXY5 557 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 DERL2Q9GZP9 239 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 REXO4Q9GZR2 422 aaKnown RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 NT5DC2Q9H857 520 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 LIN28AQ9H9Z2 209 aaKnown RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 POPDC3Q9HBV1 291 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ADAP2Q9NPF8 381 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 TIMMDC1Q9NPL8 285 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 NSMCE4AQ9NXX6 385 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 WWOXQ9NZC7 414 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 GPRC5BQ9NZH0 403 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 ERVK-11Q9UQG0 969 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 MRPS33Q9Y291 106 aaKnown RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 YARS2Q9Y2Z4 477 aaKnown RBP12.25□□□□□ -0.45
RPS28-204ENST00000602140 HRH3Q9Y5N1 445 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 GTF3C1Q12789 2109 aa12.25□□□□□ -0.45
RPS28-204ENST00000602140 MYOCOSA0A1B0GUC4 107 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 TMEM200CA6NKL6 621 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 A8MVJ9 347 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 E7ESA3 106 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 CYR61O00622 381 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 PRAMEF4O60810 478 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 OR2J2O76002 312 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 TBX6O95947 436 aaPredicted RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 TUBB4AP04350 444 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 IFNA16P05015 189 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 CERS1P27544 350 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 MTTPP55157 894 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 LIM2P55344 173 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 KRTAP10-9P60411 292 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 POU4F1Q01851 419 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 BMPR2Q13873 1038 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 FBXO48Q5FWF7 155 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 XKR6Q5GH73 641 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 PRAMEF9Q5VWM5 478 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 ADNP2Q6IQ32 1131 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms