RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MIEF1Q9NQG6 463 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 PRDM7Q9NQW5 492 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 DNAAF2Q9NVR5 837 aaKnown RBP13.04□□□□□ -0.32
IRF3-229ENST00000601373 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.04□□□□□ -0.32
IRF3-229ENST00000601373 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 PCDHGB4Q9UN71 923 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 SLC6A14Q9UN76 642 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 RNF215Q9Y6U7 377 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 MDC1Q14676 2089 aaKnown RBP13.04□□□□□ -0.32
IRF3-229ENST00000601373 PI4KAP42356 2102 aa13.04□□□□□ -0.32
IRF3-229ENST00000601373 H0YGG7 62 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 MAP3K7O43318 606 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SRPX2O60687 465 aaPredicted RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 SCELO95171 688 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 CER1O95813 267 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 CFIP05156 583 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SYPP08247 313 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 ZCCHC18P0CG32 403 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SMIM10L1P0DMW3 83 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 PVRP15151 417 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 PNLIPP16233 465 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 ATP5A1P25705 553 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 ARF3P61204 181 aaPredicted RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 GPLD1P80108 840 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 FLOT2Q14254 428 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 NR1D2Q14995 579 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 CCDC6Q16204 474 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 RNF148Q8N7C7 305 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 ACOT4Q8N9L9 421 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 C19orf47Q8N9M1 422 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SAP25Q8TEE9 199 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 SMIM10Q96HG1 83 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 AHCYL2Q96HN2 611 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 PPM1MQ96MI6 270 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 TEFMQ96QE5 360 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 PANX1Q96RD7 426 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 AICDAQ9GZX7 198 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 CAPN10Q9HC96 672 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 EHD3Q9NZN3 535 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 PACSIN3Q9UKS6 424 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 PADI4Q9UM07 663 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
IRF3-229ENST00000601373 BTBD3Q9Y2F9 522 aa13.03□□□□□ -0.32
IRF3-229ENST00000601373 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TLCD2A6NGC4 264 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 EVPLLA8MZ36 301 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ACOT8O14734 319 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 DUX1O43812 170 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TMPRSS11DO60235 418 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 PSMG1O95456 288 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ST6GAL1P15907 406 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TGM1P22735 817 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 PPIBP23284 216 aaKnown RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 HTR1EP28566 365 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 CCT8P50990 548 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 PLIN5Q00G26 463 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 MC1RQ01726 317 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 LIPEQ05469 1076 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 SLAMF1Q13291 335 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 MRM1Q6IN84 353 aaKnown RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 ABHD13Q7L211 337 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ANKRD46Q86W74 232 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 PLXDC1Q8IUK5 500 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 FAM47BQ8NA70 645 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TNIP2Q8NFZ5 429 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 OR4C6Q8NH72 309 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
IRF3-229ENST00000601373 FCRL4Q96PJ5 515 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 SERINC2Q96SA4 455 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ECSITQ9BQ95 431 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 CCDC3Q9BQI4 270 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 INPP5KQ9BT40 448 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TRIM15Q9C019 465 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 KLHL25Q9H0H3 589 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ALG2Q9H553 416 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 GAREM1Q9H706 876 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 IL21RQ9HBE5 538 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 TAS2R7Q9NYW3 318 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms