RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 QSOX2Q6ZRP7 698 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 RPS27LQ71UM5 84 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 AMER2Q8N7J2 671 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 RBMXL3Q8N7X1 1067 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 OR2W6PQ8NHA6 318 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 WDR20Q8TBZ3 569 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 ZNF483Q8TF39 744 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 TSLPQ969D9 159 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 REPS1Q96D71 796 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 CDK15Q96Q40 435 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 MTERF1Q99551 399 aaKnown RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 ROGDIQ9GZN7 287 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 EPN3Q9H201 632 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 OR51B5Q9H339 312 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 COPS7BQ9H9Q2 264 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 PRM3Q9NNZ6 103 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 SEMA4BQ9NPR2 832 aaPredicted RBP15.73■□□□□ 0.11
SSBP4-204ENST00000597724 DMRT3Q9NQL9 472 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 PRDM9Q9NQV7 894 aa15.73■□□□□ 0.11
SSBP4-204ENST00000597724 RTCAO00442 366 aaKnown RBP15.72■□□□□ 0.11
SSBP4-204ENST00000597724 CELA2AP08217 269 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 MAOAP21397 527 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 ATP5A1P25705 553 aaKnown RBP15.72■□□□□ 0.11
SSBP4-204ENST00000597724 PTX3P26022 381 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-204ENST00000597724 CD97P48960 835 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 LIM2P55344 173 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 HERVK_113P63132 956 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 TLE1Q04724 770 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 PLAG1Q6DJT9 500 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 JMJD6Q6NYC1 403 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-204ENST00000597724 ZNF793Q6ZN11 406 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 TM9SF4Q92544 642 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 ERVK-6Q9BXR3 956 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 MFRPQ9BY79 579 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 PARD6BQ9BYG5 372 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 PSD3Q9NYI0 1048 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 KCMF1Q9P0J7 381 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 EMCNQ9ULC0 261 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 DAPP1Q9UN19 280 aa15.72■□□□□ 0.11
SSBP4-204ENST00000597724 CNTRLQ7Z7A1 2325 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 TCRBV16S1A1N1A0A5B0 115 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 J3QKU1 62 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 FOXE1O00358 373 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 SAP18O00422 153 aaKnown RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 CYR61O00622 381 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 PPP6CO00743 305 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 GLRA3O75311 464 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 SCELO95171 688 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ITGAMP11215 1152 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 IMPDH1P20839 514 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 HIST1H1TP22492 207 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ATP5F1P24539 256 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ARL1P40616 181 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 NEK2P51955 445 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ARFIP1P53367 373 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 CDH13P55290 713 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 HSD17B7P56937 341 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 OR4D2P58180 307 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 RPS13P62277 151 aaKnown RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 AP2B1P63010 937 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ACTN3Q08043 901 aaPredicted RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 AP5B1Q2VPB7 878 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 GGTA1PQ4G0N0 100 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ZNF678Q5SXM1 525 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 SLC6A19Q695T7 634 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 OR4C11Q6IEV9 310 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ISLR2Q6UXK2 745 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 MILR1Q7Z6M3 343 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ZADH2Q8N4Q0 377 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ACOT4Q8N9L9 421 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 TMEM52Q8NDY8 209 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 OR4F6Q8NGB9 312 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 BRIX1Q8TDN6 353 aaKnown RBP15.71■□□□□ 0.11
SSBP4-204ENST00000597724 ADAMTS18Q8TE60 1221 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 RGMAQ96B86 450 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 NECTIN3Q9NQS3 549 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 GRID1Q9ULK0 1009 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 PPT2Q9UMR5 302 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 MMACHCQ9Y4U1 282 aa15.71■□□□□ 0.11
SSBP4-204ENST00000597724 A0A1B0GTL3 188 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 TLDC2A0PJX2 215 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PLPP1O14494 284 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SORBS2O94875 1100 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 OTCP00480 354 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 TSPAN8P19075 237 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 CRHR1P34998 444 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SOX11P35716 441 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SSR2P43308 183 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 TSFMP43897 325 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 CCT5P48643 541 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 HNRNPFP52597 415 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PRKAA2P54646 552 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PHEXP78562 749 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 MFAP5Q13361 173 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 CUL3Q13618 768 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 RCN2Q14257 317 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 BTBD16Q32M84 506 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms