RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 REPS1Q96D71 796 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 MTFMTQ96DP5 389 aaKnown RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 FRG2BQ96QU4 278 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 SERINC2Q96SA4 455 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 TBCDQ9BTW9 1192 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 NUDT9Q9BW91 350 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 NPLQ9BXD5 320 aaPredicted RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF717Q9BY31 904 aaPredicted RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 HELZ2Q9BYK8 2649 aaKnown RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 PRM3Q9NNZ6 103 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 MLXIPLQ9NP71 852 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF71Q9NQZ8 489 aaPredicted RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 FARSBQ9NSD9 589 aaKnown RBP14.11□□□□□ -0.15
SCN1B-204ENST00000596348 OXSMQ9NWU1 459 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 SLC17A7Q9P2U7 560 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 TP53TG5Q9Y2B4 290 aa14.11□□□□□ -0.15
SCN1B-204ENST00000596348 RP1L1Q8IWN7 2480 aaPredicted RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 A0A088AWK7 358 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 IGHV1-45A0A0A0MS14 117 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 IGHV3-20A0A0C4DH32 117 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 FOXE1O00358 373 aaPredicted RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 PLPP1O14494 284 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 UBFD1O14562 309 aaKnown RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 HPP00738 406 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 CYC1P08574 325 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 HNRNPFP52597 415 aaKnown RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 NAGLUP54802 743 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 LIM2P55344 173 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 DNAJB13P59910 316 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 BTG2P78543 158 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 TGM3Q08188 693 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 LCP2Q13094 533 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ABRAXAS2Q15018 415 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 PCOLCEQ15113 449 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 SGO1Q5FBB7 561 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 TCHHL1Q5QJ38 904 aaPredicted RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 CEP85LQ5SZL2 805 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 GPRIN3Q6ZVF9 776 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ANKRD37Q7Z713 158 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF843Q8N446 348 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ACOT4Q8N9L9 421 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 CCDC63Q8NA47 563 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 PLPP5Q8NEB5 264 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 SRFBP1Q8NEF9 429 aaKnown RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 CCDC126Q96EE4 140 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 FAM111AQ96PZ2 611 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 CSF3RQ99062 836 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 SLC25A23Q9BV35 468 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF700Q9H0M5 742 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 SLC25A18Q9H1K4 315 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 COPS7BQ9H9Q2 264 aaPredicted RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ZNF160Q9HCG1 818 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 ATP13A2Q9NQ11 1180 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 KCMF1Q9P0J7 381 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 TRPS1Q9UHF7 1281 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 PPT2Q9UMR5 302 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 DAPP1Q9UN19 280 aa14.1□□□□□ -0.15
SCN1B-204ENST00000596348 PCDHGA9Q9Y5G4 932 aaKnown RBP14.1□□□□□ -0.15
SCN1B-204ENST00000596348 IGKV3D-11A0A0A0MRZ8 115 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TGFBR3LH3BV60 316 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PSMD12O00232 456 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 CYR61O00622 381 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PCDH17O14917 1159 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 RGS16O15492 202 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TYROBPO43914 113 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 ERLIN1O75477 346 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 EEDO75530 441 aaKnown RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 MLYCDO95822 493 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 CELA2AP08217 269 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 SFTPCP11686 197 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 MAOAP21397 527 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 HIST1H1TP22492 207 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 JAK1P23458 1154 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PTX3P26022 381 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 BSGP35613 385 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 SSR2P43308 183 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 SOX8P57073 446 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 RAB38P57729 211 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PHEXP78562 749 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 AIMP2Q13155 320 aaKnown RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 CUL3Q13618 768 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 NSDHLQ15738 373 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 AP5B1Q2VPB7 878 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 LACTB2Q53H82 288 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TTC19Q6DKK2 380 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-204ENST00000596348 OR4C11Q6IEV9 310 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TCTN3Q6NUS6 607 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 FRMD7Q6ZUT3 714 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 NDUFAF7Q7L592 441 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 PARP9Q8IXQ6 854 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 CDYL2Q8N8U2 506 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 FAM47BQ8NA70 645 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 TCP10LQ8TDR4 215 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 AGAP11Q8TF27 550 aa14.09□□□□□ -0.15
SCN1B-204ENST00000596348 METTL21AQ8WXB1 218 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms