RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 OR4K1Q8NGD4 311 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 FAM57AQ8TBR7 257 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 FBXO25Q8TCJ0 367 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 UTP15Q8TED0 518 aaKnown RBP13.77□□□□□ -0.21
PNKP-202ENST00000593706 PYROXD1Q8WU10 500 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 ANKRD7Q92527 254 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 NEIL2Q969S2 332 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 FBXL8Q96CD0 374 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 OR4K3Q96R72 315 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 SPNS1Q9H2V7 528 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 SAYSD1Q9NPB0 183 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 DYRK1BQ9Y463 629 aa13.77□□□□□ -0.21
PNKP-202ENST00000593706 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 HS6ST1O60243 411 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 MYO1DO94832 1006 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 ENO2P09104 434 aaPredicted RBP13.76□□□□□ -0.21
PNKP-202ENST00000593706 SCTRP47872 440 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 HYAL2Q12891 473 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 TRPV3Q8NET8 790 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 ANKRD49Q8WVL7 239 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
PNKP-202ENST00000593706 AIF1LQ9BQI0 150 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
PNKP-202ENST00000593706 POPDC3Q9HBV1 291 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 ZDHHC18Q9NUE0 388 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 NSMCE4AQ9NXX6 385 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 FBXW2Q9UKT8 454 aa13.76□□□□□ -0.21
PNKP-202ENST00000593706 UTP11Q9Y3A2 253 aaKnown RBP13.76□□□□□ -0.21
PNKP-202ENST00000593706 NIPBLQ6KC79 2804 aaeCLIP13.76□□□□□ -0.21
PNKP-202ENST00000593706 HRNRQ86YZ3 2850 aaPredicted RBP13.75□□□□□ -0.21
PNKP-202ENST00000593706 IGKV3D-11A0A0A0MRZ8 115 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 FAM90A27PA6NNH2 459 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 PEX1O43933 1283 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 TFEBP19484 476 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 CLCN2P51788 898 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 PLTPP55058 493 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 GPR85P60893 370 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 REEP5Q00765 189 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 CAV1Q03135 178 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 RBBP5Q15291 538 aaKnown RBP13.75□□□□□ -0.21
PNKP-202ENST00000593706 TOR1AIP1Q5JTV8 583 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 SULF2Q8IWU5 870 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 B3GNT7Q8NFL0 401 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 ASB5Q8WWX0 329 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 CCDC77Q9BR77 488 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 SLC6A16Q9GZN6 736 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 RAB17Q9H0T7 212 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 TP63Q9H3D4 680 aaPredicted RBP13.75□□□□□ -0.21
PNKP-202ENST00000593706 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
PNKP-202ENST00000593706 NECTIN3Q9NQS3 549 aa13.75□□□□□ -0.21
PNKP-202ENST00000593706 ANKHD1Q8IWZ3 2542 aaKnown RBP13.75□□□□□ -0.21
PNKP-202ENST00000593706 ZNF469Q96JG9 3925 aaPredicted RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 ESYT3A0FGR9 886 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 NPEPPSL1A6NEC2 478 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 CDC7O00311 574 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 ITGA10O75578 1167 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 GSTA2P09210 222 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 SAT1P21673 171 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 ILF2Q12905 390 aaKnown RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 ZKSCAN8Q15776 578 aaPredicted RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 WHAMMP3Q1A5X7 153 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 CMPK2Q5EBM0 449 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 TMEM211Q6ICI0 200 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 ARHGAP11AQ6P4F7 1023 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 THOC6Q86W42 341 aaKnown RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 NKAPQ8N5F7 415 aaKnown RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 ANKRD53Q8N9V6 530 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 APCDD1LQ8NCL9 501 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 VMP1Q96GC9 406 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 FAR2Q96K12 515 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 GPR22Q99680 433 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 RBBP8Q99708 897 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 CPNE1Q99829 537 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 PELI2Q9HAT8 420 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 PNO1Q9NRX1 252 aaKnown RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 ERVK-11Q9UQG0 969 aa13.74□□□□□ -0.21
PNKP-202ENST00000593706 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
PNKP-202ENST00000593706 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 NKX2-6A6NCS4 301 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 FOXO6A8MYZ6 492 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 C4orf51C9J302 202 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 ACOT7O00154 380 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 PDE9AO76083 593 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 TUBB4AP04350 444 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 CHRNB4P30926 498 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 SSR4P51571 173 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
PNKP-202ENST00000593706 CDKL1Q00532 357 aa13.73□□□□□ -0.21
PNKP-202ENST00000593706 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms