RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SLBPQ14493 270 aaKnown RBP eCLIP22.29■■□□□ 1.16
LSM4-202ENST00000593564 FRA10AC1Q70Z53 315 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 ANKMY2Q8IV38 441 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 CEP97Q8IW35 865 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 KRT78Q8N1N4 520 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 CA5BP1Q8WTZ4 195 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 NCLNQ969V3 563 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 SDCCAG3Q96C92 435 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 VPS39Q96JC1 886 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 RUNDC3BQ96NL0 473 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 PITHD1Q9GZP4 211 aaPredicted RBP22.29■■□□□ 1.16
LSM4-202ENST00000593564 ENKD1Q9H0I2 346 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 NT5DC2Q9H857 520 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 POPDC3Q9HBV1 291 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 PRTFDC1Q9NRG1 225 aa22.29■■□□□ 1.16
LSM4-202ENST00000593564 A0A088AWK7 358 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 A0A0G2JN53 185 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 TGFBR3LH3BV60 316 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 CLDN4O14493 209 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 B3GALT2O43825 422 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 HS6ST1O60243 411 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 ZNF10P21506 573 aaPredicted RBP22.28■■□□□ 1.16
LSM4-202ENST00000593564 PPP2R1BP30154 601 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 DR1Q01658 176 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 C18orf21Q32NC0 220 aaPredicted RBP22.28■■□□□ 1.16
LSM4-202ENST00000593564 CMPK2Q5EBM0 449 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 MDGA2Q7Z553 956 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 CD163Q86VB7 1156 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 KLHL7Q8IXQ5 586 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 CCT6BQ92526 530 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 QRFPRQ96P65 431 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 CCDC77Q9BR77 488 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 CAPS2Q9BXY5 557 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 TIMMDC1Q9NPL8 285 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 PLSCR2Q9NRY7 297 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 NSMCE4AQ9NXX6 385 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 GPRC5BQ9NZH0 403 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 COQ3Q9NZJ6 369 aa22.28■■□□□ 1.16
LSM4-202ENST00000593564 MRPS33Q9Y291 106 aaKnown RBP22.28■■□□□ 1.16
LSM4-202ENST00000593564 YARS2Q9Y2Z4 477 aaKnown RBP22.28■■□□□ 1.16
LSM4-202ENST00000593564 SYNDIG1LA6NDD5 238 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 CLEC3AO75596 197 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.16
LSM4-202ENST00000593564 TPOP07202 933 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 HPDP32754 393 aaPredicted RBP22.27■■□□□ 1.16
LSM4-202ENST00000593564 SSR4P51571 173 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 HNRNPFP52597 415 aaKnown RBP22.27■■□□□ 1.16
LSM4-202ENST00000593564 SLC13A2Q13183 592 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 ADPRMQ3LIE5 342 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 ZNF595Q8IYB9 648 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 TMEM52Q8NDY8 209 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 FBXO36Q8NEA4 188 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 TREX2Q9BQ50 279 aaPredicted RBP22.27■■□□□ 1.16
LSM4-202ENST00000593564 MCMBPQ9BTE3 642 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 RHOJQ9H4E5 214 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 ADAP2Q9NPF8 381 aa22.27■■□□□ 1.16
LSM4-202ENST00000593564 TP73O15350 636 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 CDC40O60508 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
LSM4-202ENST00000593564 ZFAND5O76080 213 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 TBX6O95947 436 aaPredicted RBP22.26■■□□□ 1.15
LSM4-202ENST00000593564 TUBB4AP04350 444 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 GPR85P60893 370 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 ILF2Q12905 390 aaKnown RBP22.26■■□□□ 1.15
LSM4-202ENST00000593564 FASTKD3Q14CZ7 662 aaKnown RBP22.26■■□□□ 1.15
LSM4-202ENST00000593564 TGFBIQ15582 683 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 GPALPP1Q8IXQ4 340 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 TCAIMQ8N3R3 496 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 OR2L5Q8NG80 312 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 CHTF18Q8WVB6 975 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 DERL2Q9GZP9 239 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 REXO4Q9GZR2 422 aaKnown RBP22.26■■□□□ 1.15
LSM4-202ENST00000593564 EHD1Q9H4M9 534 aa22.26■■□□□ 1.15
LSM4-202ENST00000593564 HIVEP1P15822 2718 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 ANKDD1BA6NHY2 528 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 E7ESA3 106 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 CYR61O00622 381 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 PRKNO60260 465 aaPredicted RBP22.25■■□□□ 1.15
LSM4-202ENST00000593564 CAPN3P20807 821 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 PLA2G16P53816 162 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 KRTAP10-9P60411 292 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 PDIA2Q13087 525 aaKnown RBP22.25■■□□□ 1.15
LSM4-202ENST00000593564 ELAVL1Q15717 326 aaKnown RBP22.25■■□□□ 1.15
LSM4-202ENST00000593564 ARHGAP11AQ6P4F7 1023 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 TRIM40Q6P9F5 258 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 VN1R5Q7Z5H4 357 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 MARVELD2Q8N4S9 558 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 FAM47BQ8NA70 645 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 CAPZA3Q96KX2 299 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 SERINC2Q96SA4 455 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 TRMT1Q9NXH9 659 aaKnown RBP22.25■■□□□ 1.15
LSM4-202ENST00000593564 KCMF1Q9P0J7 381 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 DAPP1Q9UN19 280 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 ERVK-11Q9UQG0 969 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 HRH3Q9Y5N1 445 aa22.25■■□□□ 1.15
LSM4-202ENST00000593564 NCF1BA6NI72 391 aaPredicted RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 TMEM200CA6NKL6 621 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 A8MVJ9 347 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 NCF1CA8MVU1 366 aaPredicted RBP22.24■■□□□ 1.15
LSM4-202ENST00000593564 OR2J2O76002 312 aa22.24■■□□□ 1.15
LSM4-202ENST00000593564 WISP3O95389 354 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms