RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CCDC77Q9BR77 488 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ERP44Q9BS26 406 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 FNDC11Q9BVV2 318 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 MOV10L1Q9BXT6 1211 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 CCSER1Q9C0I3 900 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 LSG1Q9H089 658 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 PPIL3Q9H2H8 161 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 MMP27Q9H306 513 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ST6GALNAC4Q9H4F1 302 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 C8orf33Q9H7E9 229 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 IARS2Q9NSE4 1012 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 UBAP1Q9NZ09 502 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TMOD2Q9NZR1 351 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 ITGA11Q9UKX5 1188 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 DDX49Q9Y6V7 483 aaKnown RBP4.51□□□□□ -1.69
SMAD4-216ENST00000593223 TRANK1O15050 2925 aa4.51□□□□□ -1.69
SMAD4-216ENST00000593223 DLEC1Q9Y238 1755 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 FAM205AQ6ZU69 1335 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 KPNA7A9QM74 516 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 E9PBE3 544 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 SLC33A1O00400 549 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 ADAMDEC1O15204 470 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 NUDT21O43809 227 aaKnown RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 VEGFDO43915 354 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 RANBP6O60518 1105 aaKnown RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 PSMD10O75832 226 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC192P0DO97 292 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 ACP2P11117 423 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 FGF5P12034 268 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 TRIM21P19474 475 aaKnown RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 GLRA2P23416 452 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DNAJB1P25685 340 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 CCND2P30279 289 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 GABRA5P31644 462 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 CCR10P46092 362 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DHPSP49366 369 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 THOP1P52888 689 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 SNU13P55769 128 aaKnown RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 KIAA1024LP59773 190 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 ASIC1P78348 528 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DPYSQ14117 519 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DOC2AQ14183 400 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 SQLEQ14534 574 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 EFTUD2Q15029 972 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 METAP1DQ6UB28 335 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 TMEM270Q6UE05 265 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 AFTPHQ6ULP2 937 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC65Q8IXS2 484 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 KRT222Q8N1A0 295 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 BBS5Q8N3I7 341 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 OR13C2Q8NGS9 318 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 LRRC45Q96CN5 670 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 ARL5BQ96KC2 179 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DGAT2Q96PD7 388 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 DUX3Q96PT4 197 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 RAD9AQ99638 391 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 RHNO1Q9BSD3 238 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 TRAF4Q9BUZ4 470 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 ABHD6Q9BV23 337 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 NACA2Q9H009 215 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 THAP2Q9H0W7 228 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 FAM114A2Q9NRY5 505 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 SLC7A7Q9UM01 511 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 V9GYY5 206 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-216ENST00000593223 CARMIL3Q8ND23 1372 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 EPG5Q9HCE0 2579 aa4.5□□□□□ -1.69
SMAD4-216ENST00000593223 GAKO14976 1311 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ENO4A6NNW6 628 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 VGLL3A8MV65 326 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 MAGEB17A8MXT2 336 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC188H7C350 402 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 IFIT3O14879 490 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 MAPK13O15264 365 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 XRCC3O43542 346 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 PCDH7O60245 1069 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CACNG3O60359 315 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ERLIN1O75477 346 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 SMC2O95347 1197 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 KRT8P05787 483 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC130P13994 396 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ALDH1B1P30837 517 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 S100A5P33763 92 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 NF2P35240 595 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 LONP1P36776 959 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 PITPNBP48739 271 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 AP3M2P53677 418 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CDH11P55287 796 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 IL24Q13007 206 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 GRAPQ13588 217 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 DDX39BQ13838 428 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 GIT2Q14161 759 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 AARDQ4LEZ3 155 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ATAD3BQ5T9A4 648 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ZCCHC12Q6PEW1 402 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 MFSD7Q6UXD7 560 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 RBMS3Q6XE24 437 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CENPQQ7L2Z9 268 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ADCK2Q7Z695 626 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 FAM114A1Q8IWE2 563 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms