RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SRPX2O60687 465 aaPredicted RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 PGRP06401 933 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 SLC35G6P0C7Q6 338 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 S100A3P33764 101 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 TRA2BP62995 288 aaKnown RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 FAM174BQ3ZCQ3 159 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 TOR1AIP1Q5JTV8 583 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 SPANXN4Q5MJ08 99 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 CCNYL2Q5T2Q4 361 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 FAM71E1Q6IPT2 247 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 TRIM40Q6P9F5 258 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 ABHD17CQ6PCB6 329 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 MSANTD1Q6ZTZ1 278 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 IKBIPQ70UQ0 350 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 DNAJC22Q8N4W6 341 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 ZNF655Q8N720 491 aaPredicted RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 NAT6Q93015 286 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 GAL3ST3Q96A11 431 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 RERGQ96A58 199 aaPredicted RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 MTERF3Q96E29 417 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 TGM7Q96PF1 710 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 FCRL4Q96PJ5 515 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 KCNC2Q96PR1 638 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 KLHL31Q9H511 634 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 PRDM7Q9NQW5 492 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 GID8Q9NWU2 228 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 SEMA5BQ9P283 1151 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 FTSJ1Q9UET6 329 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
VMP1-217ENST00000593168 PRPF19Q9UMS4 504 aaKnown RBP12.8□□□□□ -0.36
VMP1-217ENST00000593168 LY6G6EA0A0G2JKS1 128 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 ARHGAP10A1A4S6 786 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 ASPDHA6ND91 283 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 H0YGG7 62 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 RTCAO00442 366 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 TXNDC9O14530 226 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SCAMP2O15127 329 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 ZSCAN9O15535 394 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 ERI3O43414 337 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 PRAMEF10O60809 474 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SCELO95171 688 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 C9P02748 559 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 MYF5P13349 255 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 CD1CP29017 333 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 PGM1P36871 562 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 DGKQP52824 942 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 PLA2G16P53816 162 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 GFERP55789 205 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 FOXM1Q08050 763 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 UGT8Q16880 541 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 HKDC1Q2TB90 917 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 TIGD2Q4W5G0 525 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 NKAIN2Q5VXU1 208 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 C8orf82Q6P1X6 216 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 WDR74Q6RFH5 385 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 R3HCC1LQ7Z5L2 792 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 CAMKMTQ7Z624 323 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SPRED1Q7Z699 444 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 TMPRSS12Q86WS5 348 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 DEFB107AQ8IZN7 70 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 TMEM132CQ8N3T6 1108 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 EID2Q8N6I1 236 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 CCDC74AQ96AQ1 378 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 COQ8BQ96D53 544 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 HOPXQ9BPY8 73 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 C17orf62Q9BQA9 187 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 SORBS1Q9BX66 1292 aaKnown RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 ROGDIQ9GZN7 287 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 REEP4Q9H6H4 257 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 WDR41Q9HAD4 459 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 FAM60AQ9NP50 221 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 U3KQA8 63 aa12.79□□□□□ -0.36
VMP1-217ENST00000593168 MN1Q10571 1320 aaPredicted RBP12.79□□□□□ -0.36
VMP1-217ENST00000593168 CFAP46Q8IYW2 2715 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 A0A0A6YYD5 115 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 LOC102723532A0A0G2JNH3 316 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 MAP3K7O43318 606 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 AKAP10O43572 662 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 KIF1CO43896 1103 aaKnown RBP12.78□□□□□ -0.36
VMP1-217ENST00000593168 TBX19O60806 448 aa12.78□□□□□ -0.36
VMP1-217ENST00000593168 GUCY1B2O75343 617 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms