RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 EPYCQ99645 322 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 ADNPQ9H2P0 1102 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 LHX9Q9NQ69 397 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 BLOC1S6Q9UL45 172 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 KCNK6Q9Y257 313 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 NCKAP1Q9Y2A7 1128 aa18.79■□□□□ 0.6
CLIP3-206ENST00000593074 FEZF1A0PJY2 475 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CCDC85CA6NKD9 419 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 ABCB7O75027 752 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 UGT2B11O75310 529 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 JRKO75564 520 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 DRD1P21728 446 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 EEF1B2P24534 225 aaKnown RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CHI3L1P36222 383 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 RXRGP48443 463 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 RAB28P51157 221 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 SCARB2Q14108 478 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 RNF130Q86XS8 419 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF420Q8TAQ5 688 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 SIPA1Q96FS4 1042 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CNDP2Q96KP4 475 aaKnown RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CAMK1GQ96NX5 476 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 APOOQ9BUR5 198 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 RAB11FIP5Q9BXF6 653 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 EPS8L2Q9H6S3 715 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 THUMPD1Q9NXG2 353 aaKnown RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 PDP1Q9P0J1 537 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 MOSPD1Q9UJG1 213 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 RTCAO00442 366 aaKnown RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 LATO43561 262 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 KCNJ13O60928 360 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 KRT75O95678 551 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 DCKP27707 260 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 PKLRP30613 574 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CASP9P55211 416 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 CSNK1G2P78368 415 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 TOP3AQ13472 1001 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 KEAP1Q14145 624 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF630Q2M218 657 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 FAHD1Q6P587 224 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 GALNT5Q7Z7M9 940 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 OR5AK3PQ8NH89 298 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 TM4SF18Q96CE8 201 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF764Q96H86 408 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 QRFPRQ96P65 431 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 DOK1Q99704 481 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 C8orf33Q9H7E9 229 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 TRPV5Q9NQA5 729 aa18.78■□□□□ 0.6
CLIP3-206ENST00000593074 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.78■□□□□ 0.6
CLIP3-206ENST00000593074 XIRP2A4UGR9 3374 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 IGKV1-8A0A0C4DH67 115 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 CACNB4O00305 520 aaPredicted RBP18.77■□□□□ 0.6
CLIP3-206ENST00000593074 SLC31A1O15431 190 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 NDUFS4O43181 175 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 C9P02748 559 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 BMP8BP34820 402 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 GSTM5P46439 218 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 MRPS21P82921 87 aaKnown RBP18.77■□□□□ 0.6
CLIP3-206ENST00000593074 PRDX1Q06830 199 aaKnown RBP18.77■□□□□ 0.6
CLIP3-206ENST00000593074 RAPSNQ13702 412 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 NEDD8Q15843 81 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 XAF1Q6GPH4 301 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 TSEN54Q7Z6J9 526 aaKnown RBP18.77■□□□□ 0.6
CLIP3-206ENST00000593074 NATD1Q8N6N6 113 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 NFKBIDQ8NI38 313 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF566Q969W8 418 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 FZD3Q9NPG1 666 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 IMP3Q9NV31 184 aaKnown RBP18.77■□□□□ 0.6
CLIP3-206ENST00000593074 EBF1Q9UH73 591 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 ADAM29Q9UKF5 820 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 CDC14AQ9UNH5 594 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 ATG2BQ96BY7 2078 aa18.77■□□□□ 0.6
CLIP3-206ENST00000593074 ARAFP10398 606 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 UQCRC2P22695 453 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 SOAT1P35610 550 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 PRIM2P49643 509 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 CLCA4Q14CN2 919 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 FAM124AQ86V42 546 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 NUDT13Q86X67 352 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 SETD9Q8NE22 299 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 OR2A1Q8NGT9 310 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 OR2L8Q8NGY9 312 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 TAMM41Q96BW9 452 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 SCARF2Q96GP6 870 aaPredicted RBP18.77■□□□□ 0.59
CLIP3-206ENST00000593074 TMEM121BQ9BXQ6 578 aaPredicted RBP18.77■□□□□ 0.59
CLIP3-206ENST00000593074 CXorf36Q9H7Y0 433 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 NDUFAF4Q9P032 175 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 GPSM3Q9Y4H4 160 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 MAP4K5Q9Y4K4 846 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 MTCH2Q9Y6C9 303 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 HSPE1-MOB4S4R3N1 261 aa18.77■□□□□ 0.59
CLIP3-206ENST00000593074 UNC80Q8N2C7 3258 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 SLC1A7O00341 560 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 OR1F1O43749 312 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 HTR1AP08908 422 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 ACADMP11310 421 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 FRKP42685 505 aaPredicted RBP18.76■□□□□ 0.59
CLIP3-206ENST00000593074 PCBP3P57721 371 aaKnown RBP18.76■□□□□ 0.59
CLIP3-206ENST00000593074 CDK6Q00534 326 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 HEPACAMQ14CZ8 416 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms