RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 VMP1Q96GC9 406 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 PPT2Q9UMR5 302 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 CLDN16Q9Y5I7 305 aa20.29■□□□□ 0.84
DDX39A-215ENST00000590696 PKDREJQ9NTG1 2253 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 A0A1B0GTH9 108 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 CLDN4O14493 209 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 TP73O15350 636 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 HS6ST1O60243 411 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 PTGS2P35354 604 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 GPR143P51810 404 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 HNRNPFP52597 415 aaKnown RBP20.28■□□□□ 0.84
DDX39A-215ENST00000590696 TGFBIQ15582 683 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 MDGA2Q7Z553 956 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 CREG2Q8IUH2 290 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 FAM47BQ8NA70 645 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 C16orf52Q8NHV5 167 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 QRFPRQ96P65 431 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 CCDC77Q9BR77 488 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 CAPS2Q9BXY5 557 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 RHOJQ9H4E5 214 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 NT5DC2Q9H857 520 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 POPDC3Q9HBV1 291 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 NSMCE4AQ9NXX6 385 aa20.28■□□□□ 0.84
DDX39A-215ENST00000590696 PPIEQ9UNP9 301 aaKnown RBP20.28■□□□□ 0.84
DDX39A-215ENST00000590696 A0A088AWK7 358 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 ANKDD1BA6NHY2 528 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 E7ESA3 106 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 B3GALT2O43825 422 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 PRKNO60260 465 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-215ENST00000590696 CDC40O60508 579 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX39A-215ENST00000590696 CLEC3AO75596 197 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 TPOP07202 933 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 ZNF10P21506 573 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-215ENST00000590696 GSTM2P28161 218 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 PLA2G16P53816 162 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 SLC12A2P55011 1212 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 GPR85P60893 370 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 FAM57AQ8TBR7 257 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 CA5BP1Q8WTZ4 195 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 SDCCAG3Q96C92 435 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 MCMBPQ9BTE3 642 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 DERL2Q9GZP9 239 aa20.27■□□□□ 0.84
DDX39A-215ENST00000590696 REXO4Q9GZR2 422 aaKnown RBP20.27■□□□□ 0.84
DDX39A-215ENST00000590696 MRPS33Q9Y291 106 aaKnown RBP20.27■□□□□ 0.84
DDX39A-215ENST00000590696 EFCAB8A8MWE9 144 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TAPBPO15533 448 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 PIAS1O75925 651 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 ZFAND5O76080 213 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TBX6O95947 436 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TFEBP19484 476 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 SSTR2P30874 369 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 SSR4P51571 173 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 CMPK2Q5EBM0 449 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 FBXO48Q5FWF7 155 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TRIM40Q6P9F5 258 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 C16orf47Q6ZP98 133 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 CAPN12Q6ZSI9 719 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 VN1R5Q7Z5H4 357 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 CLNKQ7Z7G1 428 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 CD163Q86VB7 1156 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 ZNF595Q8IYB9 648 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 ZBED8Q8IZ13 594 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 SPATA6LQ8N4H0 392 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 ZFP62Q8NB50 900 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 OR2L5Q8NG80 312 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 SEC16BQ96JE7 1060 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TMEM79Q9BSE2 394 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 PITHD1Q9GZP4 211 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 KCNF1Q9H3M0 494 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 LIN28AQ9H9Z2 209 aaKnown RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 TIMMDC1Q9NPL8 285 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 SMYD2Q9NRG4 433 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 WWOXQ9NZC7 414 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 GPRC5BQ9NZH0 403 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 COQ3Q9NZJ6 369 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 KCMF1Q9P0J7 381 aa20.26■□□□□ 0.83
DDX39A-215ENST00000590696 MTO1Q9Y2Z2 717 aaKnown RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 YARS2Q9Y2Z4 477 aaKnown RBP20.26■□□□□ 0.83
DDX39A-215ENST00000590696 CLGNO14967 610 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 HPDP32754 393 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-215ENST00000590696 LIM2P55344 173 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 POU4F1Q01851 419 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ADPRMQ3LIE5 342 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ADNP2Q6IQ32 1131 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 TCAIMQ8N3R3 496 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 OR52N2Q8NGI0 321 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ESAMQ96AP7 390 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 SERINC2Q96SA4 455 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 CSF3RQ99062 836 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 SPOCK3Q9BQ16 436 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 EHD1Q9H4M9 534 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 CAB39LQ9H9S4 337 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ADAP2Q9NPF8 381 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 DNAJC11Q9NVH1 559 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ZNF490Q9ULM2 529 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-215ENST00000590696 ERVK-11Q9UQG0 969 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 SNX24Q9Y343 169 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 HRH3Q9Y5N1 445 aa20.25■□□□□ 0.83
DDX39A-215ENST00000590696 MYOCOSA0A1B0GUC4 107 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 TMEM200CA6NKL6 621 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms