RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 RPS7P62081 194 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CSTF1Q05048 431 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 BCL2L1Q07817 233 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 RBBP4Q09028 425 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SPHARQ15513 63 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CCL14Q16627 93 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 OR2G6Q5TZ20 316 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 PAQR9Q6ZVX9 377 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM151BQ8IW70 566 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CLECL1Q8IZS7 167 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 AARSD1Q9BTE6 412 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SERHL2Q9H4I8 314 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 MRM3Q9HC36 420 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 STARD7Q9NQZ5 370 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM88BA6NKF7 163 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 OR7A17O14581 309 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SLC7A4O43246 635 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 LDB2O43679 373 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 NPR3P17342 541 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 GNPDA1P46926 289 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CLDN20P56880 219 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CRHR2Q13324 411 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 PPIGQ13427 754 aaKnown RBP eCLIP14.57□□□□□ -0.082e-9■■■□□ 15.4
CIRBP-228ENST00000590347 FAHD1Q6P587 224 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 RGL4Q8IZJ4 473 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 PIGKQ92643 395 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 COQ10AQ96MF6 247 aa14.57□□□□□ -0.08
CIRBP-228ENST00000590347 NXF3Q9H4D5 531 aaKnown RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 SPIN1Q9Y657 262 aaPredicted RBP14.57□□□□□ -0.08
CIRBP-228ENST00000590347 CCDC88CQ9P219 2028 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF623O75123 536 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 CCNB2O95067 398 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 SIX6O95475 246 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 GZMMP51124 257 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 CLDN8P56748 225 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 KCNC3Q14003 757 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 CRTC2Q53ET0 693 aaPredicted RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 SFRP5Q5T4F7 317 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 FANK1Q8TC84 345 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 MARVELD3Q96A59 401 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 GABARAPL1Q9H0R8 117 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 MFSD1Q9H3U5 465 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 SERHLQ9NQF3 203 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 MGAT4BQ9UQ53 548 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 OTOFQ9HC10 1997 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 SBF1O95248 1867 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF670-ZNF695F2Z2N8 137 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 DVL2O14641 736 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 MATN3O15232 486 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 B4GALT3O60512 393 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 IFNA7P01567 189 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 BCKDHAP12694 445 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 GDI2P50395 445 aaKnown RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 RPS25P62851 125 aaKnown RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 DEFA5Q01523 94 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 PUDPQ08623 228 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 PTGES3Q15185 160 aaKnown RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 CIR1Q86X95 450 aaPredicted RBP14.56□□□□□ -0.08
CIRBP-228ENST00000590347 TAS2R13Q9NYV9 303 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 WDR90Q96KV7 1748 aa14.56□□□□□ -0.08
CIRBP-228ENST00000590347 TRBV23-1A0A0A0MS06 115 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 FAM220BPB1ANY3 271 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PSMD3O43242 534 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF254O75437 659 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 CCNDBP1O95273 360 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ALPIP09923 528 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 HLA-DPA1P20036 260 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 DNASE1P24855 282 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PGFP49763 221 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 GPR17Q13304 367 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SPOUT1Q5T280 376 aaKnown RBP14.55□□□□□ -0.08
CIRBP-228ENST00000590347 WSCD1Q658N2 575 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 GPR155Q7Z3F1 870 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ADGRG3Q86Y34 549 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM132CQ8N3T6 1108 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 FTMTQ8N4E7 242 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 OR8K5Q8NH50 307 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 BTN2A2Q8WVV5 523 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 NPAS1Q99742 590 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 EGFL8Q99944 293 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 DUSP16Q9BY84 665 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SLCO1C1Q9NYB5 712 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 MAPRE3Q9UPY8 281 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 A0A1B0GVM2 712 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PTP4A3O75365 173 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 NDUFS3O75489 264 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 DSC1Q08554 894 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 MBTPS1Q14703 1052 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 FBXO47Q5MNV8 452 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ATXN7L2Q5T6C5 722 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PLAG1Q6DJT9 500 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 USP30Q70CQ3 517 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 OR4L1Q8NH43 312 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 ASZ1Q8WWH4 475 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SLC25A46Q96AG3 418 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 SORCS2Q96PQ0 1159 aa14.55□□□□□ -0.08
CIRBP-228ENST00000590347 PANX1Q96RD7 426 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms