RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 GPATCH1Q9BRR8 931 aaKnown RBP16.56■□□□□ 0.24
CXXC1-212ENST00000589940 SLC39A3Q9BRY0 314 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 DUSP26Q9BV47 211 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 ATAD3AQ9NVI7 634 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 FAM120CQ9NX05 1096 aaKnown RBP16.56■□□□□ 0.24
CXXC1-212ENST00000589940 UNC13CQ8NB66 2214 aa16.56■□□□□ 0.24
CXXC1-212ENST00000589940 A0A088AWK7 358 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 A0A1W2PQM1 296 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 FLRT2O43155 660 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 CPNE6O95741 557 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 B3GALT4O96024 378 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ALOX12P18054 663 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 DDCP20711 480 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF10P21506 573 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ARL4DP49703 201 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 MTTPP55157 894 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SNRPNP63162 240 aaKnown RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 CCL7P80098 99 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SNAP47Q5SQN1 464 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 C6orf10Q5SRN2 563 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 KMT5CQ86Y97 462 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ULK2Q8IYT8 1036 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 PPCDCQ96CD2 204 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 CLPTM1LQ96KA5 538 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 MIEF1Q9NQG6 463 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 STARD5Q9NSY2 213 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SH3BP4Q9P0V3 963 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SLC22A7Q9Y694 548 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 TOX3O15405 576 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 GUCY1B2O75343 617 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 KCNH1O95259 989 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 CTSBP07858 339 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SEPHS1P49903 392 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 WNT3P56703 355 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SF3A2Q15428 464 aaKnown RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 PRTGQ2VWP7 1150 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 DEFB134Q4QY38 66 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 PRMT9Q6P2P2 845 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 DLEU7Q6UYE1 221 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SCUBE1Q8IWY4 988 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 PRSS33Q8NF86 280 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 DNAJB8Q8NHS0 232 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ITCHQ96J02 903 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SLC41A2Q96JW4 573 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 BHLHE41Q9C0J9 482 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 LRRN3Q9H3W5 708 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 SERHLQ9NQF3 203 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 TEX10Q9NXF1 929 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ATXN7L1Q9ULK2 861 aaPredicted RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 MAN2B2Q9Y2E5 1009 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 MRPS2Q9Y399 296 aaKnown RBP16.55■□□□□ 0.24
CXXC1-212ENST00000589940 ASB4Q9Y574 426 aa16.55■□□□□ 0.24
CXXC1-212ENST00000589940 H0YHG0 523 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 SCN2BO60939 215 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 PLIN5Q00G26 463 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 CAPRIN1Q14444 709 aaKnown RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 PRR23CQ6ZRP0 262 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 MMP21Q8N119 569 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 D2HGDHQ8N465 521 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 KLHL6Q8WZ60 621 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 SERINC2Q96SA4 455 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 DPYSL5Q9BPU6 564 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF768Q9H5H4 540 aaKnown RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 LYARQ9NX58 379 aaKnown RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 CUL9Q8IWT3 2517 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 TBX19O60806 448 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF385BQ569K4 471 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 TCTE1Q5JU00 501 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 NDUFAF5Q5TEU4 345 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ANXA8L1Q5VT79 327 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 PGM2L1Q6PCE3 622 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 TMPRSS9Q7Z410 1059 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ANKRD46Q86W74 232 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 TICAM1Q8IUC6 712 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ARHGEF39Q8N4T4 335 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 VPS37AQ8NEZ2 397 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 OR4D9Q8NGE8 314 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 N4BP2L2Q92802 583 aaPredicted RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 CNDP2Q96KP4 475 aaKnown RBP16.54■□□□□ 0.24
CXXC1-212ENST00000589940 FAIM2Q9BWQ8 316 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 PDP2Q9P2J9 529 aa16.54■□□□□ 0.24
CXXC1-212ENST00000589940 PRSS51A0A1B0GVH4 220 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 A8MU76 341 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 CDX4O14627 284 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 DRD2P14416 443 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 DDX5P17844 614 aaKnown RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 NELFEP18615 380 aaKnown RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SLC6A2P23975 617 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 SLC14A1Q13336 389 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 KCNAB1Q14722 419 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 ZNF574Q6ZN55 896 aaPredicted RBP16.53■□□□□ 0.24
CXXC1-212ENST00000589940 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 ADA2Q9NZK5 511 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 TMEM181Q9P2C4 612 aa16.53■□□□□ 0.24
CXXC1-212ENST00000589940 FBXW2Q9UKT8 454 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms