RNA–Protein interactions for RNA: ENST00000589469.5

PSME3-209, Transcript of proteasome activator subunit 3, human

TSL 3

Gene PSME3, Length 733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME3-209	ENST00000589469		H0YIV9	168 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	GOLGA8R	I6L899	631 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	OR7A17	O14581	309 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	CLDN9	O95484	217 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	SBK3	P0C264	359 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	ITGAM	P11215	1152 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	TAC1	P20366	129 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	SOX11	P35716	441 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	CCNG1	P51959	295 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	VSNL1	P62760	191 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	BTG2	P78543	158 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	FOXK1	P85037	733 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	RCN2	Q14257	317 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	EXT1	Q16394	746 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	CPSF6	Q16630	551 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	KHDRBS2	Q5VWX1	349 aa	Known RBP	18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	TMEM151A	Q8N4L1	468 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	SIRT6	Q8N6T7	355 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469		Q8NA96	180 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	MZB1	Q8WU39	189 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	PSMF1	Q92530	271 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	CENPK	Q9BS16	269 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	DMRT3	Q9NQL9	472 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	PRDM7	Q9NQW5	492 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	TMEM216	Q9P0N5	145 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	MRPS33	Q9Y291	106 aa	Known RBP	18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	RNF11	Q9Y3C5	154 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	MMACHC	Q9Y4U1	282 aa		18.85	■□□□□ 0.61
PSME3-209	ENST00000589469	SH3BGRL	O75368	114 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	GSTA1	P08263	222 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	RPS17	P08708	135 aa	Known RBP	18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	PYGB	P11216	843 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	MAOA	P21397	527 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	RAP1GDS1	P52306	607 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	LIM2	P55344	173 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	AP5B1	Q2VPB7	878 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	PLEKHN1	Q494U1	663 aa	Predicted RBP	18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	DEPDC1	Q5TB30	811 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469		Q6ZS92	163 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	UBE3D	Q7Z6J8	389 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	TDRP	Q86YL5	185 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	FAM47B	Q8NA70	645 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	OR52B6	Q8NGF0	335 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	M1AP	Q8TC57	530 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	CPT1C	Q8TCG5	803 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	NSUN5	Q96P11	429 aa	Known RBP	18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	MTERF1	Q99551	399 aa	Known RBP	18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	OR51B5	Q9H339	312 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	DAPP1	Q9UN19	280 aa		18.84	■□□□□ 0.61
PSME3-209	ENST00000589469	IGKV3D-11	A0A0A0MRZ8	115 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	TCRBV16S1A1N1	A0A5B0	115 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	SMIM23	A6NLE4	172 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	CLDN4	O14493	209 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	ATP5A1	P25705	553 aa	Known RBP	18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	SSR2	P43308	183 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	SLCO1A2	P46721	670 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	ZRSR2	Q15696	482 aa	Known RBP	18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	IGFBP7	Q16270	282 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	ZNF793	Q6ZN11	406 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	ZNF595	Q8IYB9	648 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	IQCK	Q8N0W5	287 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	CYP4X1	Q8N118	509 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	RNF175	Q8N4F7	328 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	EFCAB3	Q8N7B9	438 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	DNAJB14	Q8TBM8	379 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	MIB2	Q96AX9	1013 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	MAGEB10	Q96LZ2	347 aa	Predicted RBP	18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	CDK15	Q96Q40	435 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	NTMT1	Q9BV86	223 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	ZBTB26	Q9HCK0	441 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	LYRM4	Q9HD34	91 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	MMP25	Q9NPA2	562 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	SEMA4B	Q9NPR2	832 aa	Predicted RBP	18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	NECTIN3	Q9NQS3	549 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	PRTFDC1	Q9NRG1	225 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	TEKT2	Q9UIF3	430 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	SCN3A	Q9NY46	2000 aa		18.83	■□□□□ 0.6
PSME3-209	ENST00000589469	CYSRT1	A8MQ03	144 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	SAP18	O00422	153 aa	Known RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	RTCA	O00442	366 aa	Known RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	SCEL	O95171	688 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	KRT15	P19012	456 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	HIST1H1T	P22492	207 aa	Predicted RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	PTX3	P26022	381 aa	Predicted RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	HSD17B3	P37058	310 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	HSD17B7	P56937	341 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	SLC26A5	P58743	744 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	RPS13	P62277	151 aa	Known RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	KCNC4	Q03721	635 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	B3GNTL1	Q67FW5	361 aa	Predicted RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	SCUBE1	Q8IWY4	988 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	AMER2	Q8N7J2	671 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	ACOT4	Q8N9L9	421 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	WDR20	Q8TBZ3	569 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	EPS8L3	Q8TE67	593 aa	Known RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	ZNF483	Q8TF39	744 aa	Predicted RBP	18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	RGMA	Q96B86	450 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	CNDP1	Q96KN2	507 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	CSF3R	Q99062	836 aa		18.82	■□□□□ 0.6
PSME3-209	ENST00000589469	C1QTNF3	Q9BXJ4	246 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms