RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SEPT10Q9P0V9 454 aa7.43□□□□□ -1.22
ATG4D-210ENST00000588972 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
ATG4D-210ENST00000588972 UNC79Q9P2D8 2635 aa7.43□□□□□ -1.22
ATG4D-210ENST00000588972 DOPEY2Q9Y3R5 2298 aa7.43□□□□□ -1.22
ATG4D-210ENST00000588972 MYO9AB2RTY4 2548 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 AHCTF1Q8WYP5 2266 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 USP27XA6NNY8 438 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 MATN3O15232 486 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 TP73O15350 636 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 SLC7A4O43246 635 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 SDC3O75056 442 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 JCHAINP01591 159 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 HKR1P10072 659 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 CCNB1P14635 433 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 PRLRP16471 622 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 CCNCP24863 283 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 OTUD4Q01804 1114 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 RAD51Q06609 339 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 IHHQ14623 411 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 PDK1Q15118 436 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 RNPS1Q15287 305 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 VWA5B1Q5TIE3 1220 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 GARNL3Q5VVW2 1013 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 SEL1L3Q68CR1 1132 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 GPAT4Q86UL3 456 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 LRRC49Q8IUZ0 686 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 TEX26Q8N6G2 289 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 UBL4BQ8N7F7 174 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 OR4C6Q8NH72 309 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 PDCD6IPQ8WUM4 868 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 DAZAP1Q96EP5 407 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 MMABQ96EY8 250 aaPredicted RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 HES6Q96HZ4 224 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 TSGA13Q96PP4 275 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 NUDCD1Q96RS6 583 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 MGME1Q9BQP7 344 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 OSBPL8Q9BZF1 889 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 ATP13A3Q9H7F0 1226 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 FZD3Q9NPG1 666 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 ASCL3Q9NQ33 180 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 MRGBPQ9NV56 204 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 ARL8BQ9NVJ2 186 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 RBM22Q9NW64 420 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 SYBUQ9NX95 663 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 TRMT1Q9NXH9 659 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
ATG4D-210ENST00000588972 LRIT1Q9P2V4 623 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 PYCARDQ9ULZ3 195 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 CA5BQ9Y2D0 317 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 FADS3Q9Y5Q0 445 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 FAM169AQ9Y6X4 670 aa7.42□□□□□ -1.22
ATG4D-210ENST00000588972 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TSPAN11A1L157 253 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TTC36A6NLP5 189 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 A8MX80 341 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 MIF4GDA9UHW6 222 aaKnown RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 APOC4-APOC2K7ER74 178 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TRAFD1O14545 582 aaPredicted RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 CSO75390 466 aaKnown RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 GCATO75600 419 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 NEBLO76041 1014 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 HSPA4LO95757 839 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 DDAH2O95865 285 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 APOC2P02655 101 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 GP1BAP07359 652 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 PRR35P0CG20 571 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 GABRB1P18505 474 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 EDN2P20800 178 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 PTPN3P26045 913 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 DEKP35659 375 aaKnown RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 SOX2P48431 317 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 CSNK1DP48730 415 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 AP1S1P61966 158 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 BCL2L1Q07817 233 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TRAF2Q12933 501 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 CDSNQ15517 529 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 ALG11Q2TAA5 492 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 SETMARQ53H47 684 aaPredicted RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 SLC29A4Q7RTT9 530 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TRIM69Q86WT6 500 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TICAM1Q8IUC6 712 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 BBS5Q8N3I7 341 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 GPR150Q8NGU9 434 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 ARRDC2Q8TBH0 407 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 ACTL9Q8TC94 416 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 TFB1MQ8WVM0 346 aaKnown RBP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 P3H4Q92791 437 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 PGAM5Q96HS1 289 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 AGAP3Q96P47 875 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 QKIQ96PU8 341 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATG4D-210ENST00000588972 ALS2CR12Q96Q35 445 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 SMIM14Q96QK8 99 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 FRG2BQ96QU4 278 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 IL12RB2Q99665 862 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 SEMA3CQ99985 751 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 H2AFJQ9BTM1 129 aa7.41□□□□□ -1.22
ATG4D-210ENST00000588972 WRAP53Q9BUR4 548 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms