RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CHERPQ8IWX8 916 aaKnown RBP12.78□□□□□ -0.36
HDAC5-208ENST00000588419 SNX31Q8N9S9 440 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 APCDD1LQ8NCL9 501 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 TMEM52Q8NDY8 209 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 FAM57AQ8TBR7 257 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 CREB3L4Q8TEY5 395 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
HDAC5-208ENST00000588419 ASB15Q8WXK1 588 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 EXT2Q93063 718 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 DMRTA2Q96SC8 542 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 CSF3RQ99062 836 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 DEFB127Q9H1M4 99 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 HPF1Q9NWY4 346 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-208ENST00000588419 F8P00451 2351 aa12.77□□□□□ -0.36
HDAC5-208ENST00000588419 A0A088AWK7 358 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 NKX2-6A6NCS4 301 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 ANKDD1BA6NHY2 528 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 CLDN4O14493 209 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 PRKNO60260 465 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 SMIM10L1P0DMW3 83 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 C1GALT1C1LP0DN25 315 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 GNAZP19086 355 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 CERS1P27544 350 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TRHRP34981 398 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TAS2R39P59534 338 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 DR1Q01658 176 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 MGAT5Q09328 741 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 PDIA2Q13087 525 aaKnown RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 FASTKD3Q14CZ7 662 aaKnown RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 CMPK2Q5EBM0 449 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 STEAP4Q687X5 459 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 IL20RBQ6UXL0 311 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TMIGD1Q6UXZ0 262 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 ADAMTSL2Q86TH1 951 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 CDH24Q86UP0 819 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 ZC3HC1Q86WB0 502 aaKnown RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 KLHDC8AQ8IYD2 350 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 KRT78Q8N1N4 520 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 SPATA6LQ8N4H0 392 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 FBXO36Q8NEA4 188 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 OR52N2Q8NGI0 321 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 ANKRD49Q8WVL7 239 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 SMIM10Q96HG1 83 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TIMMDC1Q9NPL8 285 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 MRPS33Q9Y291 106 aaKnown RBP12.77□□□□□ -0.37
HDAC5-208ENST00000588419 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 PDZD2O15018 2839 aa12.77□□□□□ -0.37
HDAC5-208ENST00000588419 USP27XA6NNY8 438 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ACOT7O00154 380 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 WWP2O00308 870 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ADAM10O14672 748 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 PIAS1O75925 651 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 OR2J2O76002 312 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 TUBB4AP04350 444 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 HSPA7P48741 367 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 HNMTP50135 292 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ADNP2Q6IQ32 1131 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 RPRMLQ8N4K4 120 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 MARVELD2Q8N4S9 558 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 PSD4Q8NDX1 1056 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 TTLQ8NG68 377 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ESAMQ96AP7 390 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 PDLIM5Q96HC4 596 aaKnown RBP12.76□□□□□ -0.37
HDAC5-208ENST00000588419 VPS39Q96JC1 886 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 REXO4Q9GZR2 422 aaKnown RBP12.76□□□□□ -0.37
HDAC5-208ENST00000588419 TRIM45Q9H8W5 580 aaPredicted RBP12.76□□□□□ -0.37
HDAC5-208ENST00000588419 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 CLK4Q9HAZ1 481 aaKnown RBP12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 FREM3P0C091 2139 aa12.76□□□□□ -0.37
HDAC5-208ENST00000588419 ANKRD17O75179 2603 aaKnown RBP12.75□□□□□ -0.37
HDAC5-208ENST00000588419 AKAP9Q99996 3911 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 A0A0G2JMM0 328 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 A0A1W2PPB8 328 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 A0A1W2PRS3 328 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 PINLYPA6NC86 204 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 KIR3DP1A8MWS1 328 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 NPIPA2E9PIF3 369 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 CES2O00748 559 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 SH3BGRLO75368 114 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 ZFAND5O76080 213 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 OR6B1O95007 311 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 TNNI3P19429 210 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 IVDP26440 423 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 SOX3P41225 446 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 HSD17B7P56937 341 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 CDKL1Q00532 357 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 STX4Q12846 297 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 XKR6Q5GH73 641 aa12.75□□□□□ -0.37
HDAC5-208ENST00000588419 SLCO4C1Q6ZQN7 724 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms