RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 VPS33AQ96AX1 596 aa3.26□□□□□ -1.89
CACNA1A-208ENST00000587451 PLEKHA3Q9HB20 300 aa3.26□□□□□ -1.89
CACNA1A-208ENST00000587451 TTLL3Q9Y4R7 772 aa3.26□□□□□ -1.89
CACNA1A-208ENST00000587451 POGZQ7Z3K3 1410 aa3.26□□□□□ -1.89
CACNA1A-208ENST00000587451 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 KBTBD11O94819 623 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 FGF19O95750 216 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 TCF4P15884 667 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 PPP5CP53041 499 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 CETN1Q12798 172 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 ZNF273Q14593 569 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 RALBP1Q15311 655 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 ARMCX4Q5H9R4 360 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 TEX35Q5T0J7 233 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 UTF1Q5T230 341 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 FAM46CQ5VWP2 391 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 LIPJQ5W064 366 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 ARMCX5Q6P1M9 558 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 BTNL8Q6UX41 500 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 SPATA21Q7Z572 469 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 HSCBQ8IWL3 235 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 TIGD4Q8IY51 512 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 PCNPQ8WW12 178 aaKnown RBP3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 FERMT1Q9BQL6 677 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 YTHDF1Q9BYJ9 559 aaKnown RBP3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 SH3GLB2Q9NR46 395 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 MRGBPQ9NV56 204 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 KLK4Q9Y5K2 254 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 HEG1Q9ULI3 1381 aa3.25□□□□□ -1.89
CACNA1A-208ENST00000587451 FER1L5A0AVI2 2057 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 A0A087WV48 116 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 RTL8CO15255 209 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 TBX10O75333 385 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 RPP38P78345 283 aaKnown RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 NAAAQ02083 359 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 CYLC2Q14093 348 aaPredicted RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 TIMM50Q3ZCQ8 353 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 KLHL10Q6JEL2 608 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 TMEM64Q6YI46 380 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 ZC3H3Q8IXZ2 948 aaKnown RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 C4orf19Q8IY42 314 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 TMEM99Q8N816 258 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 OR13C5Q8NGS8 318 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 KIF18AQ8NI77 898 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 HEXDCQ8WVB3 486 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 C5orf66Q9H5L9 145 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 ANKEF1Q9NU02 776 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 NKIRAS2Q9NYR9 191 aa3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 HBS1LQ9Y450 684 aaKnown RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 KLF2Q9Y5W3 355 aaPredicted RBP3.24□□□□□ -1.89
CACNA1A-208ENST00000587451 UMODL1Q5DID0 1318 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 SALL1Q9NSC2 1324 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 LOC390937A0A1W2PQ73 354 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 FCGR3BO75015 233 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 SEMA4FO95754 770 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 RPN1P04843 607 aaKnown RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 UMPSP11172 480 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 PPP2R1AP30153 589 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 BRCC3P46736 316 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 RAD23AP54725 363 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 NAGLUP54802 743 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 IGLV3-21P80748 117 aaPredicted RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 ITPK1Q13572 414 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 CDO1Q16878 200 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 TTC31Q49AM3 519 aaPredicted RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 SHEQ5VZ18 495 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 REP15Q6BDI9 236 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 TXNRD3NBQ6F5E7 133 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 RALGAPA1Q6GYQ0 2036 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 TMED8Q6PL24 325 aaPredicted RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 RAPH1Q70E73 1250 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 NUFIP2Q7Z417 695 aaKnown RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 VASH2Q86V25 355 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 DZIP1Q86YF9 867 aaKnown RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 SLC43A2Q8N370 569 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 LIPHQ8WWY8 451 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 BADQ92934 168 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 CNDP2Q96KP4 475 aaKnown RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 RCHY1Q96PM5 261 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 HSD17B14Q9BPX1 270 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 INPP5KQ9BT40 448 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 MTIF3Q9H2K0 278 aaKnown RBP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 VIPAS39Q9H9C1 493 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 CLIC5Q9NZA1 410 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 C5AR2Q9P296 337 aa3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 NIP7Q9Y221 180 aaKnown RBP eCLIP3.23□□□□□ -1.89
CACNA1A-208ENST00000587451 TRBV5-4A0A0C4DH59 114 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 ZNF732B4DXR9 585 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 MLNRO43193 412 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 SCO2O43819 266 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 GRAP2O75791 330 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 OR6B1O95007 311 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 VIMP08670 466 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 PDGFRAP16234 1089 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 GMPSP49915 693 aaPredicted RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 HLCSP50747 726 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms