RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 POLG2Q9UHN1 485 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 TCFL5Q9UL49 500 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 SNX6Q9UNH7 406 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 ZNF451Q9Y4E5 1061 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 CSAG2Q9Y5P2 127 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 HEATR5BQ9P2D3 2071 aa7.47□□□□□ -1.21
VMP1-204ENST00000587259 MGAT4DA6NG13 374 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 TLCD2A6NGC4 264 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ENO4A6NNW6 628 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 TMEM233B4DJY2 109 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 TMEM150CB9EJG8 249 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PSMD12O00232 456 aaPredicted RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 MEN1O00255 615 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 PIP5K1BO14986 540 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 HCRTR1O43613 425 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 CLDN9O95484 217 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PRR35P0CG20 571 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 MTHFD1P11586 935 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 ACPPP15309 386 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 MAPK1P28482 360 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 HALP42357 657 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 SLC6A12P48065 614 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 HSPA7P48741 367 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 AGTR2P50052 363 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 RAP1GDS1P52306 607 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ACY1Q03154 408 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 TRAF3Q13114 568 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 CUL3Q13618 768 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PHKG1Q16816 387 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 DEFB110Q30KQ9 67 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 UGT3A2Q3SY77 523 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 MMEL1Q495T6 779 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 SPATS1Q496A3 300 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 C1orf189Q5VU69 101 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 CLEC6AQ6EIG7 209 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PRMT9Q6P2P2 845 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 WASH2PQ6VEQ5 465 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 HACD2Q6Y1H2 254 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ZNF517Q6ZMY9 492 aaPredicted RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 NET1Q7Z628 596 aaPredicted RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 TRIM73Q86UV7 250 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 AMZ2Q86W34 360 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 DSELQ8IZU8 1212 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PGAM4Q8N0Y7 254 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 KIF2BQ8N4N8 673 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 RBM15BQ8NDT2 890 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 OR4F6Q8NGB9 312 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 OR4E2Q8NGC2 313 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 OR2L2Q8NH16 312 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 JADE3Q92613 823 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ROPN1LQ96C74 230 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 REPS1Q96D71 796 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 C12orf66Q96MD2 445 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 NSUN5Q96P11 429 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 TMEM79Q9BSE2 394 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 RAB11FIP5Q9BXF6 653 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 RAB33BQ9H082 229 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 XKR8Q9H6D3 395 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ACTR8Q9H981 624 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 DNAJC11Q9NVH1 559 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 CUEDC1Q9NWM3 386 aaPredicted RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 GPR83Q9NYM4 423 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 ZIM2Q9NZV7 527 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 GMPR2Q9P2T1 348 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 ADAMTS6Q9UKP5 1117 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 IKZF3Q9UKT9 509 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 ACSL5Q9ULC5 683 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 MAPRE3Q9UPY8 281 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 PDE10AQ9Y233 779 aa7.46□□□□□ -1.22
VMP1-204ENST00000587259 COPG1Q9Y678 874 aaKnown RBP7.46□□□□□ -1.22
VMP1-204ENST00000587259 ANKRD17O75179 2603 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 ARHGAP10A1A4S6 786 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SERTM1A2A2V5 107 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 GSAPA4D1B5 854 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 WIPF3A6NGB9 483 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 BTN3A3O00478 584 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 OR7A17O14581 309 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CLGNO14967 610 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ANGPT2O15123 496 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 TAPBPO15533 448 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 SGTAO43765 313 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 DPM1O60762 260 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CNOT3O75175 753 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 ULK1O75385 1050 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 OR4F21O95013 312 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ZBTB11O95625 1053 aaPredicted RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 STAMBPO95630 424 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ATP6V1G2O95670 118 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 RECKO95980 971 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 NPPAP01160 153 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 JUNP05412 331 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 SNRPB2P08579 225 aaKnown RBP7.45□□□□□ -1.22
VMP1-204ENST00000587259 HSD3B1P14060 373 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 ST6GAL1P15907 406 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 CDH3P22223 829 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 HSD3B2P26439 372 aa7.45□□□□□ -1.22
VMP1-204ENST00000587259 RORAP35398 523 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms