RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ADNP2Q6IQ32 1131 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 FRA10AC1Q70Z53 315 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 VN1R5Q7Z5H4 357 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 SULF2Q8IWU5 870 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 KLHDC8AQ8IYD2 350 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 CYP4Z2PQ8N1L4 340 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 FBXO36Q8NEA4 188 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 PHF10Q8WUB8 498 aaKnown RBP13.06□□□□□ -0.32
ATG4D-206ENST00000586863 CCT6BQ92526 530 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 NCLNQ969V3 563 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 RHBDF1Q96CC6 855 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 MS4A6EQ96DS6 147 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 GPAMQ9HCL2 828 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 PNO1Q9NRX1 252 aaKnown RBP13.06□□□□□ -0.32
ATG4D-206ENST00000586863 CTNNAL1Q9UBT7 734 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 FBXW2Q9UKT8 454 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-206ENST00000586863 SAR1BQ9Y6B6 198 aa13.06□□□□□ -0.32
ATG4D-206ENST00000586863 HCFC1P51610 2035 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 LRIT2A6NDA9 550 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 NCF1BA6NI72 391 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 NCF1CA8MVU1 366 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 E7ESA3 106 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 E9PLN8 166 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PRRG2O14669 202 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 TFECO14948 347 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 HS6ST1O60243 411 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PRAMEF4O60810 478 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 ITGA10O75578 1167 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 WISP3O95389 354 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 GNAZP19086 355 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 GPR143P51810 404 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 RAB38P57729 211 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 GPR85P60893 370 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 FBXO48Q5FWF7 155 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PRAMEF9Q5VWM5 478 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 CAPN12Q6ZSI9 719 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 MDGA2Q7Z553 956 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 C17orf53Q8N3J3 647 aaPredicted RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 FAM47BQ8NA70 645 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 VPS39Q96JC1 886 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 FAR2Q96K12 515 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 CSF3RQ99062 836 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 RHOJQ9H4E5 214 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PRTFDC1Q9NRG1 225 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PPT2Q9UMR5 302 aa13.05□□□□□ -0.32
ATG4D-206ENST00000586863 PPIEQ9UNP9 301 aaKnown RBP13.05□□□□□ -0.32
ATG4D-206ENST00000586863 A0A1B0GTH9 108 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 TAPBPO15533 448 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 PEX1O43933 1283 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 CERS1P27544 350 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 NR0B1P51843 470 aaKnown RBP13.04□□□□□ -0.32
ATG4D-206ENST00000586863 PLA2G16P53816 162 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 KRTAP10-9P60411 292 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 SLC13A2Q13183 592 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 TGFBIQ15582 683 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 CD163Q86VB7 1156 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 TTLQ8NG68 377 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 SREK1Q8WXA9 508 aaKnown RBP13.04□□□□□ -0.32
ATG4D-206ENST00000586863 SDCCAG3Q96C92 435 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 RUNDC3BQ96NL0 473 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 NPLQ9BXD5 320 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-206ENST00000586863 DERL2Q9GZP9 239 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 CAB39LQ9H9S4 337 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
ATG4D-206ENST00000586863 WWOXQ9NZC7 414 aa13.04□□□□□ -0.32
ATG4D-206ENST00000586863 ANKHD1Q8IWZ3 2542 aaKnown RBP13.04□□□□□ -0.32
ATG4D-206ENST00000586863 TMEM200CA6NKL6 621 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 KLRC4-KLRK1H3BQV0 150 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 PHGDHO43175 533 aaKnown RBP13.03□□□□□ -0.32
ATG4D-206ENST00000586863 B3GALT2O43825 422 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATG4D-206ENST00000586863 H2AFYO75367 372 aaKnown RBP13.03□□□□□ -0.32
ATG4D-206ENST00000586863 CLEC3AO75596 197 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 TPOP07202 933 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 TFEBP19484 476 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 GSTM2P28161 218 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 PTGS2P35354 604 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 RPL21P46778 160 aaKnown RBP13.03□□□□□ -0.32
ATG4D-206ENST00000586863 HSD17B7P56937 341 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
ATG4D-206ENST00000586863 ADPRMQ3LIE5 342 aa13.03□□□□□ -0.32
ATG4D-206ENST00000586863 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms