RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 RTCAO00442 366 aaKnown RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 RIPK2O43353 540 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 TSFMP43897 325 aaKnown RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 AP2B1P63010 937 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 PCDH1Q08174 1060 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 PCBP2Q15366 365 aaKnown RBP eCLIP17.86■□□□□ 0.45
TPM4-204ENST00000586499 EXT1Q16394 746 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 TAOK1Q7L7X3 1001 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 MYLK4Q86YV6 388 aaPredicted RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 KIF2BQ8N4N8 673 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 PTGR2Q8N8N7 351 aaPredicted RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 FAM47BQ8NA70 645 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 SCYL1Q96KG9 808 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 SERINC2Q96SA4 455 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 BARD1Q99728 777 aaKnown RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 NPLQ9BXD5 320 aaPredicted RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.86■□□□□ 0.453e-9■■■□□ 17.9
TPM4-204ENST00000586499 MMP25Q9NPA2 562 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 ZNF180Q9UJW8 692 aa17.86■□□□□ 0.45
TPM4-204ENST00000586499 RP1L1Q8IWN7 2480 aaPredicted RBP17.86■□□□□ 0.45
TPM4-204ENST00000586499 CCDC189A1A4V9 331 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 CBX6O95503 412 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 MTTPP55157 894 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 LIM2P55344 173 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 RAB38P57729 211 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 DDX39BQ13838 428 aaKnown RBP17.85■□□□□ 0.45
TPM4-204ENST00000586499 GTF2H2Q13888 395 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 ACER2Q5QJU3 275 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 GRHL2Q6ISB3 625 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 GTF2H2CQ6P1K8 395 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 ZNF793Q6ZN11 406 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 TRMT10CQ7L0Y3 403 aaKnown RBP17.85■□□□□ 0.45
TPM4-204ENST00000586499 GOLGA7Q7Z5G4 137 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 CRLF3Q8IUI8 442 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 FAM26EQ8N5C1 309 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 GRHL3Q8TE85 626 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 UBE2E3Q969T4 207 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 PHF21BQ96EK2 531 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 CSF3RQ99062 836 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 SORBS1Q9BX66 1292 aaKnown RBP17.85■□□□□ 0.45
TPM4-204ENST00000586499 SLC29A3Q9BZD2 475 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 OR51B5Q9H339 312 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 IPPKQ9H8X2 491 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 ACTR8Q9H981 624 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 COPS7BQ9H9Q2 264 aaPredicted RBP17.85■□□□□ 0.45
TPM4-204ENST00000586499 PRTFDC1Q9NRG1 225 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 XPR1Q9UBH6 696 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 DAPP1Q9UN19 280 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 CLDN16Q9Y5I7 305 aa17.85■□□□□ 0.45
TPM4-204ENST00000586499 HECTD1Q9ULT8 2610 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 A0A088AWK7 358 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 MYOCOSA0A1B0GUC4 107 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 CYR61O00622 381 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 E2F3O00716 465 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 ABHD2P08910 425 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 SNRPAP09012 282 aaKnown RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 ZNF10P21506 573 aaPredicted RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 CNTFP26441 200 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 PPP2R1BP30154 601 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 HPDP32754 393 aaPredicted RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 SRSF11Q05519 484 aaKnown RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 SCUBE1Q8IWY4 988 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 BEST3Q8N1M1 668 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 NFAM1Q8NET5 270 aaPredicted RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 HUS1BQ8NHY5 278 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 PRR7Q8TB68 274 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 ELP5Q8TE02 316 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 ZNF354BQ96LW1 612 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 KCNC2Q96PR1 638 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 MTERF1Q99551 399 aaKnown RBP17.84■□□□□ 0.45
TPM4-204ENST00000586499 MAPKAP1Q9BPZ7 522 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 TXLNGYQ9BZA5 131 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 ANKRD10Q9NXR5 420 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 KCMF1Q9P0J7 381 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 TEKT2Q9UIF3 430 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 RNF11Q9Y3C5 154 aa17.84■□□□□ 0.45
TPM4-204ENST00000586499 TRAV17A0A0B4J275 112 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 OR5H15A6NDH6 313 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 SAGE2PA6NJ88 616 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 RBP1P09455 135 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 MYBL2P10244 700 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 ATP5A1P25705 553 aaKnown RBP17.83■□□□□ 0.44
TPM4-204ENST00000586499 EEF1DP29692 281 aaKnown RBP17.83■□□□□ 0.44
TPM4-204ENST00000586499 TGM3Q08188 693 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 SLC13A2Q13183 592 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 SLC29A2Q14542 456 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 CPSF6Q16630 551 aaKnown RBP eCLIP17.83■□□□□ 0.44
TPM4-204ENST00000586499 DEPDC1Q5TB30 811 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 LIPJQ5W064 366 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 ADGRD1Q6QNK2 874 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 CHSY3Q70JA7 882 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 RPS27LQ71UM5 84 aaKnown RBP17.83■□□□□ 0.44
TPM4-204ENST00000586499 CLNKQ7Z7G1 428 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 ACOT4Q8N9L9 421 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 CDK15Q96Q40 435 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 TAAR6Q96RI8 345 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 RNF32Q9H0A6 362 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 EPB41L4BQ9H329 900 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 CDCP1Q9H5V8 836 aa17.83■□□□□ 0.44
TPM4-204ENST00000586499 NOL11Q9H8H0 719 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms