RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
VMP1-203ENST00000586245 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 OVCH1Q7RTY7 1134 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 DTX1Q86Y01 620 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 AMER3Q8N944 861 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 FKBP10Q96AY3 582 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 ZNF717Q9BY31 904 aaPredicted RBP12.89□□□□□ -0.35
VMP1-203ENST00000586245 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 LYARQ9NX58 379 aaKnown RBP12.89□□□□□ -0.35
VMP1-203ENST00000586245 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
VMP1-203ENST00000586245 MCM8Q9UJA3 840 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
VMP1-203ENST00000586245 A0A0A6YYD5 115 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 GNG14A0A1W2PPG7 69 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 GUCY1B2O75343 617 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 TGDSO95455 350 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 ALBP02768 609 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 GBAP04062 536 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 MAPK1P28482 360 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 TPP2P29144 1249 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 TIA1P31483 386 aaKnown RBP eCLIP12.88□□□□□ -0.35
VMP1-203ENST00000586245 STAT5AP42229 794 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 MAPK12P53778 367 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 RPL38P63173 70 aaKnown RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 GNGT1P63211 74 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 COX15Q7KZN9 410 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 ADAMTS18Q8TE60 1221 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 GATA6Q92908 595 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 NKD1Q969G9 470 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 CHMP6Q96FZ7 201 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 AKTIPQ9H8T0 292 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 AKIRIN1Q9H9L7 192 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 NPHS2Q9NP85 383 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 MKKSQ9NPJ1 570 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 C14orf105Q9NVL8 296 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 SIRT5Q9NXA8 310 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 DKK4Q9UBT3 224 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 PHF11Q9UIL8 331 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 FBXW2Q9UKT8 454 aa12.88□□□□□ -0.35
VMP1-203ENST00000586245 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
VMP1-203ENST00000586245 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 C21orf140B9A014 251 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 SDHDO14521 159 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 TMPRSS11DO60235 418 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 LBPP18428 481 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 IL10P22301 178 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 CPN2P22792 545 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 EPHA3P29320 983 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 LSP1P33241 339 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 XCR1P46094 333 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 AQP5P55064 265 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 LIM2P55344 173 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 RAB38P57729 211 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 RPS15P62841 145 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 KIAA0040Q15053 153 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 NCF4Q15080 339 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 RFTN2Q52LD8 501 aaPredicted RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 GALNT18Q6P9A2 607 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 MAVSQ7Z434 540 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 GPR180Q86V85 440 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 PARP9Q8IXQ6 854 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms