RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NXPE4Q6UWF7 544 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 SBSNQ6UWP8 590 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 THOC6Q86W42 341 aaKnown RBP10.83□□□□□ -0.68
LIG3-207ENST00000586119 MMGT1Q8N4V1 131 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TMEM125Q96AQ2 219 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 KRT12Q99456 494 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 FAM129AQ9BZQ8 928 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 L2HGDHQ9H9P8 463 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 KCMF1Q9P0J7 381 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TNFRSF10DQ9UBN6 386 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 VWA7Q9Y334 891 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 NCKAP5O14513 1909 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 FAM166BA8MTA8 275 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 KLRC4-KLRK1H3BQV0 150 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 FCHO1O14526 889 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ZNF354AO60765 605 aaPredicted RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 RNH1P13489 461 aaKnown RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 IGFBP2P18065 325 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 SAT1P21673 171 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 AHRP35869 848 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 CLCN2P51788 898 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 NUP107P57740 925 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 PMPCAQ10713 525 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 ZNF460Q14592 562 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ZNF750Q32MQ0 723 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 GLE1Q53GS7 698 aaKnown RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 ADNP2Q6IQ32 1131 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 LRRC8EQ6NSJ5 796 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 SPNS3Q6ZMD2 512 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ABHD13Q7L211 337 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 STRA8Q7Z7C7 330 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 CLNKQ7Z7G1 428 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 CNTN4Q8IWV2 1026 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 PPIL6Q8IXY8 311 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 CYP4Z2PQ8N1L4 340 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ARMC10Q8N2F6 343 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 TMEM156Q8N614 296 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ZNF321PQ8N8H1 164 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ZFP62Q8NB50 900 aaPredicted RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 BBOF1Q8ND07 529 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 B3GNT7Q8NFL0 401 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 LILRB4Q8NHJ6 448 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 NCLNQ969V3 563 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 COQ3Q9NZJ6 369 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 ASIC3Q9UHC3 531 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 KLF13Q9Y2Y9 288 aaPredicted RBP10.82□□□□□ -0.68
LIG3-207ENST00000586119 LIPGQ9Y5X9 500 aa10.82□□□□□ -0.68
LIG3-207ENST00000586119 MPDZO75970 2070 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 MTORP42345 2549 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 NPEPPSL1A6NEC2 478 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 NPIPA2E9PIF3 369 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 NPIPA3F8WFD2 350 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PSMD12O00232 456 aaPredicted RBP10.81□□□□□ -0.68
LIG3-207ENST00000586119 PRAMEF4O60810 478 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 OR6B1O95007 311 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 TBX6O95947 436 aaPredicted RBP10.81□□□□□ -0.68
LIG3-207ENST00000586119 HNRNPH1P31943 449 aaKnown RBP10.81□□□□□ -0.68
LIG3-207ENST00000586119 SNTB1Q13884 538 aaKnown RBP10.81□□□□□ -0.68
LIG3-207ENST00000586119 PPP1R3AQ16821 1122 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 GXYLT1Q4G148 440 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 FBXO48Q5FWF7 155 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 SPANXN3Q5MJ09 141 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PRAMEF9Q5VWM5 478 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 IL20RBQ6UXL0 311 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 SCUBE1Q8IWY4 988 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 FAM47BQ8NA70 645 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 OR5M9Q8NGP3 310 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 ANKRD49Q8WVL7 239 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 CERS2Q96G23 380 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 CFAP36Q96G28 342 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 CSF3RQ99062 836 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 AIF1LQ9BQI0 150 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 RAB17Q9H0T7 212 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PELI2Q9HAT8 420 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PPANQ9NQ55 473 aaKnown RBP10.81□□□□□ -0.68
LIG3-207ENST00000586119 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PNPLA3Q9NST1 481 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 DYRK1BQ9Y463 629 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 PSAT1Q9Y617 370 aa10.81□□□□□ -0.68
LIG3-207ENST00000586119 ZNF469Q96JG9 3925 aaPredicted RBP10.8□□□□□ -0.68
LIG3-207ENST00000586119 WWP2O00308 870 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 DNALI1O14645 258 aaPredicted RBP10.8□□□□□ -0.68
LIG3-207ENST00000586119 RAD51CO43502 376 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 PIAS1O75925 651 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 OR2J2O76002 312 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 SERPINA6P08185 405 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 ELK3P41970 407 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 AP1S2P56377 157 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 PPIAP62937 165 aaKnown RBP10.8□□□□□ -0.68
LIG3-207ENST00000586119 C8orf74Q6P047 294 aa10.8□□□□□ -0.68
LIG3-207ENST00000586119 KIAA0408Q6ZU52 694 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms