RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CRATP43155 626 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MAGEA8P43361 318 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TSFMP43897 325 aaKnown RBP10.74□□□□□ -0.69
LIG3-204ENST00000585740 RABIFP47224 123 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TPMTP51580 245 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 CYP4F2P78329 520 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MC1RQ01726 317 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 LRRC32Q14392 662 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 GK3PQ14409 553 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MLC1Q15049 377 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 ZC3H12BQ5HYM0 836 aaKnown RBP10.74□□□□□ -0.69
LIG3-204ENST00000585740 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
LIG3-204ENST00000585740 OR4C11Q6IEV9 310 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TMEM26Q6ZUK4 368 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 USP51Q70EK9 711 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MFSD9Q8NBP5 474 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 PJA1Q8NG27 643 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 OR2L3Q8NG85 312 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 FAM174AQ8TBP5 190 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 CREB3L4Q8TEY5 395 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 LZICQ8WZA0 190 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 MYOCQ99972 504 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 SLC6A16Q9GZN6 736 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 XKR8Q9H6D3 395 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 PRDM8Q9NQV8 689 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 ACSS1Q9NUB1 689 aaPredicted RBP10.74□□□□□ -0.69
LIG3-204ENST00000585740 TRNAU1APQ9NX07 287 aaKnown RBP10.74□□□□□ -0.69
LIG3-204ENST00000585740 EHD3Q9NZN3 535 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TAAR2Q9P1P5 351 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 C3orf18Q9UK00 162 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 ERVK-11Q9UQG0 969 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 DMTF1Q9Y222 760 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 ANGPT4Q9Y264 503 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 TRIOO75962 3097 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 LRP4O75096 1905 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 PLXND1Q9Y4D7 1925 aa10.74□□□□□ -0.69
LIG3-204ENST00000585740 FEZF1A0PJY2 475 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 PRAMEF26H0Y7S4 382 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 PLOD2O00469 737 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 LATO43561 262 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 GFRA3O60609 400 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 FKBP9O95302 570 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 BMP10O95393 424 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SNAP29O95721 258 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SEMA4FO95754 770 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 TBX6O95947 436 aaPredicted RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 TNFP01375 233 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 IGLV3-19P01714 112 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 NTRK1P04629 796 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 ARAFP10398 606 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 GABRG2P18507 467 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 EFNA1P20827 205 aaPredicted RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 FPR1P21462 350 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 DNAJA1P31689 397 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 ACSL1P33121 698 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SOAT1P35610 550 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 DCTP40126 519 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 FRKP42685 505 aaPredicted RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 SSR2P43308 183 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 PRIM2P49643 509 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 CLDN2P57739 230 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 FOXK2Q01167 660 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 IL18R1Q13478 541 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 CCINQ13939 588 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SCARB2Q14108 478 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SPIDRQ14159 915 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 KIR2DS3Q14952 304 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 ADPRMQ3LIE5 342 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
LIG3-204ENST00000585740 BORAQ6PGQ7 559 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 TBPL2Q6SJ96 375 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SPESP1Q6UW49 350 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 ANGPTL8Q6UXH0 198 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 AMIGO1Q86WK6 493 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 NAGSQ8N159 534 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 ARL10Q8N8L6 244 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 PNPT1Q8TCS8 783 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 LCN9Q8WX39 176 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 CIDECQ96AQ7 238 aaPredicted RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 ZBED6CLQ96FA7 236 aaPredicted RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 HSH2DQ96JZ2 352 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 BMFQ96LC9 184 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 DOHHQ9BU89 302 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 EPS8L2Q9H6S3 715 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SLC6A20Q9NP91 592 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 THUMPD1Q9NXG2 353 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 TAS2R7Q9NYW3 318 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 USP36Q9P275 1121 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 ANKMY1Q9P2S6 941 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 FANCMQ8IYD8 2048 aa10.73□□□□□ -0.69
LIG3-204ENST00000585740 MDC1Q14676 2089 aaKnown RBP10.73□□□□□ -0.69
LIG3-204ENST00000585740 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms