RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 HTD2P86397 168 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 RPA4Q13156 261 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 KIF26BQ2KJY2 2108 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 SMU1Q2TAY7 513 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 KRTAP27-1Q3LI81 207 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CEP55Q53EZ4 464 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 PDLIM3Q53GG5 364 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 TMEM207Q6UWW9 146 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CHST3Q7LGC8 479 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 METTL23Q86XA0 190 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 C10orf53Q8N6V4 93 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CAMKVQ8NCB2 501 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ANKRD20A12PQ8NF67 263 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 GPRC5AQ8NFJ5 357 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 OR5AP2Q8NGF4 316 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 VANGL1Q8TAA9 524 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 FIBINQ8TAL6 211 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 RNF139Q8WU17 664 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 KCNE4Q8WWG9 221 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ARHGAP45Q92619 1136 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ATP6V0A1Q93050 837 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CRACR2AQ9BSW2 395 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 FUCA2Q9BTY2 467 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ZMYND12Q9H0C1 365 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 FAM49AQ9H0Q0 323 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 TLE6Q9H808 572 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 Q9H8V8 135 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CHST11Q9NPF2 352 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CHCHD3Q9NX63 227 aaKnown RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 C19orf25Q9UFG5 118 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 PPP2R2CQ9Y2T4 447 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CCL27Q9Y4X3 112 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ATP8B3O60423 1300 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 UBR3Q6ZT12 1888 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 A0A1W2PPK0 400 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 A0A1W2PRV1 198 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 STX6O43752 255 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 GLRA3O75311 464 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 CDK2AP2O75956 126 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 SERPINB2P05120 415 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 LHCGRP22888 699 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 PAX7P23759 505 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 STIP1P31948 543 aaKnown RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 PRKCIP41743 596 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 IFNAR2P48551 515 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 C1QTNF8P60827 252 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 BEX3Q00994 111 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 SLC39A6Q13433 755 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 RCN2Q14257 317 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 SGSM1Q2NKQ1 1148 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 HFEQ30201 348 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 C2orf76Q3KRA6 126 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 BOLA3Q53S33 107 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 XKR6Q5GH73 641 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ZC2HC1BQ5TFG8 222 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 G2E3Q7L622 706 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 PTAR1Q7Z6K3 402 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 TMEM110Q86TL2 294 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 RYBPQ8N488 228 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 ANKRD13CQ8N6S4 541 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 OR10Q1Q8NGQ4 319 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 PROX1Q92786 737 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ITFG2Q969R8 447 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 LRRC3BQ96PB8 259 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 NAA11Q9BSU3 229 aaPredicted RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 CLEC7AQ9BXN2 247 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 RNF186Q9NXI6 227 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 AATFQ9NY61 560 aaKnown RBP eCLIP3.86□□□□□ -1.79
NF1-220ENST00000581113 UTP6Q9NYH9 597 aaKnown RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 TMEM181Q9P2C4 612 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 TXNDC16Q9P2K2 825 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
NF1-220ENST00000581113 PCDHGA1Q9Y5H4 931 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 R4GN57 208 aa3.86□□□□□ -1.79
NF1-220ENST00000581113 C10orf71Q711Q0 1435 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 ATP10DQ9P241 1426 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 USP42Q9H9J4 1324 aaKnown RBP3.85□□□□□ -1.79
NF1-220ENST00000581113 GOLGB1Q14789 3259 aaKnown RBP3.85□□□□□ -1.79
NF1-220ENST00000581113 ZNF831Q5JPB2 1677 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 PXDNLA1KZ92 1463 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 MRC1P22897 1456 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 SGK1O00141 431 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 PSMA7O14818 248 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 EXTL3O43909 919 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 KHDRBS3O75525 346 aaKnown RBP3.85□□□□□ -1.79
NF1-220ENST00000581113 RPS6KA5O75582 802 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 GSRP00390 522 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 ZNF883P0CG24 379 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 EPCAMP16422 314 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 DPEP1P16444 411 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 CD27P26842 260 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 CAMLGP49069 296 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 VAMP7P51809 220 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 HILS1P60008 231 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 IRX1P78414 480 aaPredicted RBP3.85□□□□□ -1.79
NF1-220ENST00000581113 MZT1Q08AG7 82 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 NPTX1Q15818 432 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 CAVIN4Q5BKX8 364 aa3.85□□□□□ -1.79
NF1-220ENST00000581113 UGT3A1Q6NUS8 523 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms