RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SLC39A3Q9BRY0 314 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 ALG12Q9BV10 488 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 MRPL13Q9BYD1 178 aaKnown RBP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 PRRG4Q9BZD6 226 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 EGLN1Q9GZT9 426 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 LHPPQ9H008 270 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 ESRP2Q9H6T0 727 aaKnown RBP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 SUDS3Q9H7L9 328 aaPredicted RBP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 VCPKMTQ9H867 229 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 FN3KRPQ9HA64 309 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 YAE1D1Q9NRH1 226 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 MRPL17Q9NRX2 175 aaKnown RBP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 PKD2L2Q9NZM6 624 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 CHRNA9Q9UGM1 479 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 PCDHA12Q9UN75 941 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 ST3GAL5Q9UNP4 418 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 B3GALT5Q9Y2C3 310 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 MRPS2Q9Y399 296 aaKnown RBP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 CEP152O94986 1710 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 NWD2Q9ULI1 1742 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 PTPN23Q9H3S7 1636 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 EHBP1L1Q8N3D4 1523 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 ZFYVE9O95405 1425 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 ADAMTS13Q76LX8 1427 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 SF3B1O75533 1304 aaKnown RBP eCLIP2.93□□□□□ -1.94
KPNB1-208ENST00000580019 KIF7Q2M1P5 1343 aa2.93□□□□□ -1.94
KPNB1-208ENST00000580019 THSD7AQ9UPZ6 1657 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PXDNQ92626 1479 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 FYCO1Q9BQS8 1478 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 MTUS2Q5JR59 1369 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 A0A0U1RRA0 63 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 TCRBV5S1A1TA0A578 114 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 MBLAC1A4D2B0 266 aaPredicted RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PRSS46E5RG02 174 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 NPIPA3F8WFD2 350 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 H7C1Q1 480 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 M0R296 226 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 RHODO00212 210 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 NDUFS8O00217 210 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 WRBO00258 174 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 DVL1O14640 695 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 CHEK1O14757 476 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 OGTO15294 1046 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 INPPL1O15357 1258 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 LRRTM2O43300 516 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 LANCL1O43813 399 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SNNO75324 88 aaPredicted RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ATP6AP2O75787 350 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 OR4F21O95013 312 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PLAUP00749 431 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SERPINF2P08697 491 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 UQCRFS1P1P0C7P4 283 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 RALBP11234 206 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 IRF2P14316 349 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 AXLP30530 894 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 DCTDP32321 178 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 RFC2P35250 354 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ADRA1AP35348 466 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PTGER4P35408 488 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 APOBEC1P41238 236 aaKnown RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 EPS15P42566 896 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SUCLG1P53597 346 aaKnown RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 CTSCP53634 463 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 NUCB2P80303 420 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 RELQ04864 619 aaPredicted RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SLC3A1Q07837 685 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 NCBP1Q09161 790 aaKnown RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 HSPA14Q0VDF9 509 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ST3GAL1Q11201 340 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 DMP1Q13316 513 aaPredicted RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 STIM1Q13586 685 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 STX1AQ16623 288 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ANKRD55Q3KP44 614 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 FBXO48Q5FWF7 155 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 DUS1LQ6P1R4 473 aaKnown RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 KCTD18Q6PI47 426 aaPredicted RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 CLEC2AQ6UVW9 174 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SIGLEC15Q6ZMC9 328 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 CDHR3Q6ZTQ4 885 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PATL1Q86TB9 770 aaKnown RBP2.92□□□□□ -1.94
KPNB1-208ENST00000580019 COMMD2Q86X83 199 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 GRAMD2AQ8IUY3 354 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ADGRF4Q8IZF3 695 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 BEST3Q8N1M1 668 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 UBE2J2Q8N2K1 259 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SLC5A8Q8N695 610 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 LRRC17Q8N6Y2 441 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 HORMAD2Q8N7B1 307 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 NANOGP1Q8N7R0 232 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ZNF321PQ8N8H1 164 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 SPERTQ8NA61 448 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 TRIM58Q8NG06 486 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 OR5M8Q8NGP6 311 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 PPP4R1Q8TF05 950 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 TAAR8Q969N4 342 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 ERGIC1Q969X5 290 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 TMEM18Q96B42 140 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 C19orf60Q96EN9 201 aa2.92□□□□□ -1.94
KPNB1-208ENST00000580019 GRAMD2BQ96HH9 432 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms